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Information for unigene UN40644
| FASTA Sequence |
| Unigene ID: UN40644 | Length: 1193 |
SSR | | ATACTTTTTTTTCTATTAATTAAATCACCGATCAGATTCAGGAAGAAGTGAAGAAACGAAAGAGAGAAGAAGGTGAGATGGGTGTG
GATTACTACAAGCTTCTACAGGTCGATAGAAGCGCCAGCGACGATGACCTCAAGAAAGCTTACAGAAAGCTCGCCATGAAATGGCA
TCCCGACAAGAACCCCACCAACAAAAAAGAAGCCGAAGCTAAATTCAAACAGATCTCCGAAGCCTACGATGTTCTTAGCGATCCTC
AGAAGAGAGCGGTGTACGATCAGTACGGTGAGGAAGGTTTAAAAGGGAACGTTCCACCTCCTAATGCTCCTGGTGGTGGAGCTTCC
TACTTCTCCACAGGATTCAACCCCAGAAGTGCTGATGATATATTCGCTGAGTTTTTCGGTTTCTCGACTCCCTTTGGTGGAGGAGG
AGGAGGAGGTGGTGGTGGTGGATCAAGTCACCACAACCACCACCACCATCATCATCATCATCAGGCTGCACCTAGGAAAGTGGCTC
CAATCGAGAGCAAGCTCCCTTGTAGCCTTGAAGATCTCTACAAAGGAACCACCAAGAAGATGAAAATCTCAAGGGAGATTCTAGAT
GTCAGCGGCAAAGCAACGCAAACGGAAGAGATTCTAACGATCGGAGTGAAACCAGGATGGAAGAAAGGCACCAAGATCACATTCCC
CGAGAAAGGCAACGAACATCCCGGAGTGATTCCGGCTGATCTCGTCTTCATCATCGACGAAAAGCCACATCCTGTGTTCACACGTG
ACGGCAACGACCTGATCGTCACGCAGAAGATCTCCCTAGCTGAGGCCTTAACAGGCTACACCGTGAACCTAACGACCCTTGATGGC
CGAACACTTACGATCCCAGTAACCAACGTGATACATCCGGAGTACGAAGAAGTGGGCCTAAAGAGGGGATGCCACTTCAGAAAGAT
CAGACAAAGAAAGGGAACTTGAGGATCAAGTTCAGCATCAAGTTCCCAGCGAGGTTAACTACAGAACAGAAGTCTGGTTTCAAGAA
GCTTCTTGGGTGATAGTCAAGATTGGGTTCTAATGCCCCTCCCCCACCCCCCTGTTTTTTAAATTATTTTTTCAAGATAGTTCTTA
CAAGATTTGGTTATTACATGTCCTCTAGAAACAAAATTTGAAAGTTAAAAAAATGTTTTTTGTGTGTTTGCTACT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_194577 DNAJ heat shock protein [Arabidopsis thaliana] | 1329 | 3e-144 |
| ABN08703 Heat shock protein DnaJ [Medicago truncatula] | 1087 | 3e-116 |
| XP_002886287 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 793 | 4e-082 |
| XP_002869499 DNAJ heat shock family protein [Arabidopsis lyrata subsp. lyrata] | 791 | 6e-082 |
| NP_179646 DNAJ heat shock protein-like protein [Arabidopsis thaliana] | 790 | 8e-082 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P59910 DnaJ homolog subfamily B member 13 | 529 | 6e-053 |
| P25685 DnaJ homolog subfamily B member 1 | 374 | 6e-035 |
| Q9QYJ3 DnaJ homolog subfamily B member 1 | 367 | 4e-034 |
| Q3MI00 DnaJ homolog subfamily B member 1 | 363 | 1e-033 |
| Q9D832 DnaJ homolog subfamily B member 4 | 362 | 1e-033 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O49457 Heat-shock protein | 1329 | 2e-144 |
| A2Q505 Heat shock protein DnaJ | 1087 | 2e-116 |
| Q9SIL3 At2g20560/T13C7.15 | 790 | 5e-082 |
| B9MYD4 Predicted protein | 730 | 5e-075 |
| B9N3J3 Predicted protein | 726 | 1e-074 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G28480.1 DNAJ heat shock family protein | 1334 | 3e-147 |
| AT3G08910.1 DNAJ heat shock protein, putative | 1038 | 5e-113 |
| AT1G59725.1 DNAJ heat shock protein, putative | 847 | 7e-091 |
| AT2G20560.1 DNAJ heat shock family protein | 790 | 3e-084 |
| AT2G20550.1 DNAJ chaperone C-terminal domain-containing protein | 701 | 6e-074 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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