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Information for unigene UN40649

FASTA Sequence
Unigene ID: UN40649Length: 966 SSR 
GCAAGTAAATGCCCTGAGGAGTGTCGCGAGGCCATCTCCTCCCTTGTGTACGCGGCCGCTAGAGTCTCTGAAGTGCCTGAGCTTCG
CGACCTCAGGTCTTTGTTTGCTGACAGATACATGACTAATTCACTTGAACAGTTTGTGAACCCTGAGTTTGTGGAGAGATTCAAGG
CGGAGCCCCCGTCAAAGGAAATGAAGGTAGAGCTTCTCCAGGAGATTGCCTTAGAGTACTCCATCAAATGGGATGCCAAGTCTTTA
GAGCAGAGGCTCTACACATCACCACCTACTCATCATCATGCTGCTGAAAACCCAAAAACAAAGGCCAATTATAATCCTGGAAAGAC
GAATGAAAACAGAAGTAGTCTTTCGTTTCATGTCAGAGAAGAGTCTCCGAATGCCAAGTCCACGAGTAAAAGAAACGAAGAGGACT
CCATGACTAGAAGCAAAAGTTGTGTTACTGGCCACGAGGAGGAGGAGGAGGAGGATGATCCAGAAAACAAACCTTTCTACTACAGA
TTCATCATGCCCAGCAACGACAAACCCAAAATAGAGAAACAGGAAAGCCTTCCGGAGAAGATGACCAAGTCTGATCTCATGTCCAA
AGACACTGAGTCTCCTCCTAGTCCTAGTGCGGGAAAACCAAAGCCGAGATCAGTGAGAAGACGATTAGCGAAGCCGCCGCCCTCAG
ATGCGCCTAGTGGTGAAGATTTGATGAGAAGTTATAAGAAGATGGAGAAAGCAAGCGGAGAGGGGATAAGGAGGATGAATCGTCGA
ACAGCGTCGTGGCAGTCCAACGTCCCAGATTTTGATGAGGTCGCTGCTCGCGTACATGCTCTCACACGAAACTGATGTATCTTCTT
CTCCTATATCATTCATTAGAGGATATGTACAACTTGTCGTGTCTGTGAATGAATTAATTCTTTGTAAACCAAAAGTGACATGTGAG
AAAAAAAAGTTTAGTTTTAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002889320 hypothetical protein ARALYDRAFT_477272 [Arabidopsis lyrata subsp. lyrata]8642e-090
NP_001031304 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]8542e-089
NP_178109 Regulator of Vps4 activity in the MVB pathway protein [Arabidopsis thaliana]8542e-089
AAG52247 unknown protein; 49130-47169 [Arabidopsis thaliana]4483e-042
XP_002299697 predicted protein [Populus trichocarpa]4053e-037

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q2V4B8 Putative uncharacterized protein At1g79910.28541e-089
Q8L402 Putative uncharacterized protein At1g799108541e-089
Q9CA94 Putative uncharacterized protein F19K16.134482e-042
B9GFN8 Predicted protein (Fragment)4052e-037
B9GX14 Predicted protein (Fragment)3917e-036

Arabidopsis top hits (Blast detail)Scoree value
AT1G79910.1 unknown protein9085e-098
AT1G79910.2 unknown protein9085e-098
AT4G32350.1 unknown protein2599e-023
AT1G52315.1 unknown protein2212e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  100%

Unigene MembersMember information