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Information for unigene UN40659
| FASTA Sequence |
| Unigene ID: UN40659 | Length: 715 |
SSR | | GGACAATAGTTTCTTAACAATGGTGTCGTCGAAGAAACCGAACCAGGAGAAGAAGCCGAGTAGCGATGGTGCTCGAAATTCACGCA
GCAGCTCCGGTTCTAATTCCAAGAAGAAGACACCGAAATTACAGGCCATTGCGAAGAAAGAGCCGGAGGTTCACGAGATCTCGGAG
TCTTCGAGCAGCGGCTCCGATGAGCCGAAGAAGACAAGCAATGGGGGAGGAGGAGGAGGAGTGGAAGACGCTAATAAGATGATTAG
GTTTCCGATGAATAGGGTACGGAGGATAATGAGAAGCGACAACTCTGCTCCTCAGATCATGCAGGACGCCGTGTTTCTTGTCAACA
AAGCCACGGAATTGTTCATTGAGAGGTTTTCTGAAGAAGCTTATGAAAGTTCTGTCCAGGACAAAAAGAAATTCATCCACTACAAA
CATCTCTCATCTGTAGTGAGTAACGACGAGAGATACGAGTTCCTTGCGGATTGTGTTCCTGAGAAACTAAAAGCAGAGGTCGCGTT
GGAGGAATGGGAAAGAAGCATGACTGATGCAGGCTGAAATGAAACCGGTTTGGGACCTACCTGGTCTTTACGTTTCTTAAATAACA
CCATAATGAGATTGCCAGTTTGCCACATATTCCATTTTCAAAAGAATTGCAGTATTTTACTTCGTAGTATACTCTACCTACCGTTA
ATTTTACAAATCAGAGTATAAAATATT
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_563803 DNA polymerase epsilon subunit 4 [Arabidopsis thaliana] | 491 | 2e-047 |
| BAF00898 hypothetical protein [Arabidopsis thaliana] | 489 | 3e-047 |
| XP_002892427 hypothetical protein ARALYDRAFT_334085 [Arabidopsis lyrata subsp. lyrata] | 313 | 7e-027 |
| XP_002313518 predicted protein [Populus trichocarpa] | 302 | 1e-025 |
| XP_002532613 DNA polymerase epsilon subunit, putative [Ricinus communis] | 284 | 2e-023 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9NRG0 Chromatin accessibility complex protein 1 | 154 | 9e-010 |
| Q9JKP8 Chromatin accessibility complex protein 1 | 150 | 3e-009 |
| C6Y4D0 Putative transcription factor C16C4.22 | 149 | 3e-009 |
| Q6BX14 DNA polymerase epsilon subunit C | 148 | 4e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9LN09 At1g07980 | 491 | 1e-047 |
| Q0WP19 Putative uncharacterized protein At1g07980 | 489 | 2e-047 |
| B9HQA8 Predicted protein | 302 | 9e-026 |
| B9T2Z4 DNA polymerase epsilon subunit, putative | 284 | 1e-023 |
| D6MK76 Transcription factor (Fragment) | 269 | 6e-022 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G07980.1 NF-YC10 (NUCLEAR FACTOR Y, SUBUNIT C10); transcription factor | 492 | 5e-050 |
| AT3G48590.1 NF-YC1 (NUCLEAR FACTOR Y, SUBUNIT C1); DNA binding / transcription activator/ transcription factor | 116 | 2e-006 |
| AT5G63470.1 NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | 115 | 3e-006 |
| AT5G63470.2 NF-YC4 (NUCLEAR FACTOR Y, SUBUNIT C4); DNA binding / transcription factor | 115 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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