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Information for unigene UN40692
| FASTA Sequence |
| Unigene ID: UN40692 | Length: 1472 |
SSR | | CCCCTTTTGATCTCCCCCGTCCACTTCTCTCTCTCTCTCTCTGTCTATCTTCTACTTCGTTGGTGCAGTCCCGATTCTATTGATTA
GATTTTAGATTCAAGCTGACCTATGCTTGACGCGGTTGCTCCCGGAGACATGGCTTCCCTCGATTCCGACTTACTGCAGCTTCAGG
AGATGTCTACCTTCGTCCTCAAATCGAGACCCGAATTCACTCAGAAGCTCTTCGATCAGTGGCTCTCTCTCCCCGAAGCTCACCGT
CAGGTTGCTTCATTGCTTCAAGATGCAATAGCTGGAGCTCCTTTGAACGTTCCCGGGAGTGCATCTGGTTCAGGTCCTGGCACCAG
CAACTCTTTACCGTCCATGTTCCCTGCCGGAAGTGCTCCCCCGCTTTCACCGAGAAGCTGCGGTTCTCCTCGTACGATGAAACAGA
GGGCCCCTTCCAATTTAGGCTCTCCTCTTAAAGTACTCAACGAGCCTGTTAAAGAGTCCATACCTCAGTTTTATTTTCAAAATGGC
CGTCCACCTCCAAGCGAGATAAAAGAGCAATGTATGTTTAGAGTCAACCACTTTTTCTACGGCCACACGGATGGACTGCAAATACA
AGAGTTCAAATTAGTCACCCGTGAAATCTGCAAGCTTCCGTCTTTCTTCTCCACGTCGCTTTTCAGGAAGATCGATGTCAATAACA
CAGGTTTTGTTACCAGGGAAGCATTTATTGATTATTGGGTAAACGGGAACATGTTGATAATGGATAAAACTACTCAAATATTCAAG
ATACTAAAGCAGCAAAATCAGAGTTTCCTTGTGAAGGATGATTTCAAGCCACTACTTAAAGAACTTTTGGCGACACACCCTGGGCT
TGAATTTTTGCAAGGCACACCTGAATTCCAAGAAAGATATGCTGAAACTGTTACATACAGAATTTTTTACTACATAAATAGATCTG
GAAATGGTCGACTTACATATAGGGAGCTTAAACTTGGAAATTTAATCGATGCTATGCTTCATGCTGATGAAGAAGAAGATATCAAC
AAAGTGTTACGGTACTTCTCATATGAGCATTTCTATGTCATATACTGCAAGTTCTGGGAGCTCGATACTGATCACGATTTCCTTAT
TGACAAAGAAAACCTTATGAAATATGGCAACCATGCTCTTACTTACCGCATTGTCGACAAATATTCTCCCAGGTTGCTAGGAAGTT
CACTAGCAAAGTTGAAGGGAAAATGGGGTATGAGGATTTTGTCTATTTCATACTTGCGGAAGAAGATAAATCCTCAGAGCCTAGCC
TTGAATATTGGTTTAAGTGCATTGACTTGGATGCAAATGGGATACTGACGCGAAATGAGATGCAATTCTTTTATGAGGAGCAGTTA
CATCGAATGGAGTGTATGGCGCAGAGCTGTTCTTTTTGAGGATATATTATGTCAGCTAATTGATATGATCGGACAGAGAATGAAAG
CTATATAACC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002872330 calcium-binding EF hand family protein [Arabidopsis lyrata subsp. lyrata] | 1745 | 2e-192 |
| NP_568509 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 1731 | 8e-191 |
| NP_198242 protein phosphatase 2 (formerly 2A), regulatory subunit B'' [Arabidopsis thaliana] | 1728 | 2e-190 |
| XP_002521983 calcium ion binding protein, putative [Ricinus communis] | 1474 | 5e-161 |
| XP_002269177 PREDICTED: hypothetical protein [Vitis vinifera] | 1465 | 6e-160 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q06190 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha | 504 | 7e-050 |
| Q9Y5P8 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit beta | 469 | 8e-046 |
| Q9Z176 Serine/threonine-protein phosphatase 2A regulatory subunit B'' subunit alpha | 421 | 3e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q5QIT3 Protein phosphatase 2A beta | 1731 | 6e-191 |
| Q8VZQ4 Putative phosphatase 2A regulatory subunit B protein | 1728 | 1e-190 |
| B9S7L4 Calcium ion binding protein, putative | 1474 | 4e-161 |
| B9I5P2 Predicted protein | 1463 | 7e-160 |
| B9IPA8 Predicted protein | 1458 | 3e-159 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G28850.2 calcium-binding EF hand family protein | 1743 | 1e-194 |
| AT5G28900.1 calcium-binding EF hand family protein | 1740 | 3e-194 |
| AT1G54450.1 calcium-binding EF-hand family protein | 1358 | 5e-150 |
| AT5G44090.1 calcium-binding EF hand family protein, putative / protein phosphatase 2A 62 kDa B'' regulatory subunit, putative | 1157 | 1e-126 |
| AT1G03960.1 calcium-binding EF hand family protein | 1114 | 1e-121 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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