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Information for unigene UN40700

FASTA Sequence
Unigene ID: UN40700Length: 1261 SSR 
GAACTGAAACAGAATCTTCTTCCCGCAAGTTCCAGATGGGAACATTAACACAGACAAAACATGAATAGTTTTACATATTGAAATAA
GCAAAACAAAATGAGAATCAAAAAGAGAAGCAAAGGAAACAATGAGAATAAGAAAGTGTTGATAAATGATCATCATTCATCGTCTG
AGTACTCAAACTTAACTGAATGTGATTGAAGATCAATCTCTCCTCCTCTGTAGCTTCCTCTCTTCTTCTTCGTCTTCTCACGTCGG
AAACCCCTTCCTCTGACTTGCCCTAGAACCTCTTGAGCTTTAGCACCATAGCCCGAATCAGCACCACCCTTCGCCCAATAAGAGTT
GTCTTTAAGCCTATCGTCAGTGAACACAACTTCCTCAACGTTCACTCTCTGAAACGGTTTCTTCGGCTCTTTTGAGTCGGAAAGCC
CCTTTCCAGACTTCTTATTAGTTGATTTTGTTTCAACGTTACCGTTCTCCTGGACATCAGTTTGCTTAACAGGGGTTTCTTGAACA
TCCATATCTTCTTCTTCTCCTGCCTTCTTCCTCTGTTTAGAGTCCTCATCATCATCATCATCCTCTGTCTGTTCTTTTGTCTCTTC
TTCAGGCTCTGATCTTTTTCTCTTCTTGGAAACTCTCTCCTCATCACCCAAAGTCTCAGCCTCGGCAGCTTTCGACTTGGTCTTCT
TCTTCTTCTTTTTCTCTTTCACTCCAACTTCGATCTCACCATCAGTCTTCTCCTCCTTAGCTACCTCCACTTTCGGTTCCTTCTTG
TTCTTCTTCTTCTCTTTAATCCCATCTTCAATCTCACCATCAGTCTCTTTAACCTTCTTCTTCTTCTTTTTCTCCTTCTTTACTTC
CTCCGCAGCTTCTTTCTTTTGATCATCAGATGCATTCTTCTCCACTTCATCCCCTGATTCATCTTTCCCCTCCACAGCTTCTAGAC
TCTTTTTCAAAAACACACCGTAAACTTCCTCTAAATCCGGTAACGCACTATCCTATTCCTTCTTCTCGATTTCGGCTTCGGAGAGC
AGCTTCTTGAAGCATTTAGAAAACCCGCATCGCTCCAAGTACTGAGCAATCGAACGGAGAAGGAGAGCCTTCTGCTCCGATTTCAA
GCTCAAGGCTTTGCTCTCTTTCGCCATGATAACGGGTCTAGAGATCAACACTTGGCGAGGCGTGAGAGCTAAGAGGGCTGGGTTTA
TGGTGATTCGAGTAGGTTTTGTTGCTAGGGTTTTGGGCGTATGTGAAGCTCGTGAGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200522 uncharacterized protein [Arabidopsis thaliana]9987e-106
AAM61154 unknown [Arabidopsis thaliana]9942e-105
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]6788e-069
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]6025e-060
XP_002262877 PREDICTED: hypothetical protein [Vitis vinifera]5221e-050

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12771e-023
Q14978 Nucleolar and coiled-body phosphoprotein 12133e-016
Q55FI4 Nucleolar protein 582053e-015
Q869E1 DNA ligase 11963e-014
P36044 Protein MNN41963e-014

TrEMBL top hits (Blast detail)Scoree value
Q9LU74 AT5g57120/MUL3_69984e-106
Q8LFX8 Putative uncharacterized protein9941e-105
Q93WC7 AT5g57120/MUL3_66024e-060
B9HAX3 Predicted protein5092e-049
A3CJE4 Putative uncharacterized protein4733e-045

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).9982e-108
AT3G28770.1 unknown protein2098e-017
AT1G56660.1 unknown protein2071e-016
AT3G57150.1 NAP57 (Arabidopsis thaliana homologue of NAP57); pseudouridine synthase1802e-013
AT2G22795.1 unknown protein1693e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
63  100%

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