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Information for unigene UN40748
| FASTA Sequence |
| Unigene ID: UN40748 | Length: 775 |
SSR | | TTTTTGTGGAGAGCAGAGCAGGCGGCGATGAAGACGGTGATGGGAAGGGTAACGAGTGAGAGACCGATCAGTCTCTCAAAGGCGGC
AACGCTTCTCTCAAGTTTCGTTTCCTCAGAGACAGAGGCCTCTCAAGACGTCGCCGCGTACCTCCGACGCGCCTCCGCTGCCTTCA
CTGAGCTTAAGAGCTTCCACAGAGAGATTAGATCTACTACCAAGCCTGAATCCGAGGCAAAGGATGAGAAGAAGAAGAGCAGAGAA
GAAGAAGTTGTTGTTGAGGAGGAGAAGGAGAGTGTGAAGTTGGAAGAGGAGGCAGTGAAGAAAGAGAGAAAGAAGAAGAAGAAGAA
GAAGAGCAAAGGTGAAGAAGATGTTGTTGTTGAAGAAAAAGTGGATGTGAAGTTAGAAGAAGAGCAAAGGAACGATGATGAGAGCA
AGAAGAAAAAGAAGCACAAAAGGAAGAAAGGTGAAGAGAAGGTGAAGTTAGAAGAAGAGCAAAGGAGTGACGAGAAGAAGAAAGGT
GAAGATGTTGTTGACGAGAAGGTGAAGAATGAAGAGAAAAAGAAGAAGAAGCGGAAGAGTGATGGAGAGGTTGGTTTTGAGGAGAA
GAAGAAGAGCAAGAAGAAGAGGAAATCAAAGGAGATTGATCCTTGAACTTGCTTTCTTTTGAGACCAATTTTGTAGTGTGATTTTT
TTTTTTCAAAAGTTTCGGGTAAGTGTAGGCTTAAGATGTTCTTTATTGACAATTATGATTGATAAAAAGATTTGATTTTGTGGAAC
T
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_200811 uncharacterized protein [Arabidopsis thaliana] | 344 | 2e-030 |
| XP_002866363 hypothetical protein ARALYDRAFT_496141 [Arabidopsis lyrata subsp. lyrata] | 340 | 6e-030 |
| XP_001068849 PREDICTED: hypothetical protein [Rattus norvegicus] | 248 | 3e-019 |
| CBZ55484 conserved hypothetical protein [Neospora caninum Liverpool] | 248 | 3e-019 |
| EFN82081 hypothetical protein EAI_01038 [Harpegnathos saltator] | 243 | 1e-018 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P36044 Protein MNN4 | 228 | 3e-018 |
| Q55FI4 Nucleolar protein 58 | 227 | 3e-018 |
| A5E4P1 Protein PXR1 | 215 | 8e-017 |
| Q869E1 DNA ligase 1 | 202 | 3e-015 |
| A3LYI0 Stress response protein NST1 | 190 | 7e-014 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LVH1 Genomic DNA, chromosome 5, P1 clone:MGO3 | 344 | 1e-030 |
| Q9LGZ9 Genomic DNA, chromosome 3, BAC clone:F1D9 | 238 | 3e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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