Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40762

FASTA Sequence
Unigene ID: UN40762Length: 1051 SSR 
GAATTTCTTTACGACTCTTTCTTAGTGGGTTTGTTGTTGTTGTTGTTGTGCTCTGCAAAATGATTACTGAGCTTGAGATGGGGAAA
GCTGAAAGTGAGCTAGAACTGGGTCTAGGGCTCAGTCTTGGTGGTGGAACGGCGGCCAAGATTGGTAAACCAGGCGGTGGCGGCGC
GTGGGGAGAGCGTGGGAGGCTCTTGACTGCAAAAGATTTTCCTTCTGTTGGCTCTAAACGAGCTGCTGACTCTGCTTCTCACGCTG
GTGCATCTCCTCCTCGTTCAAGCAGTCAAGTTGTGGGATGGCCGCCTATTGGATCTCACAGGATGAACAGTTTAGCTGCAAAGTCG
GCTAGGGAAGAAGAGGAAGCTGGTAAGAAGAAAGTGGATGATGATGAGCCTAAAGACGTGGCCAAGAAAGTGCAAGTCGGGTTTAT
TAAGGTGAACATGGATGGAGTTGCTATAGGAAGGAAAGTGGACTTGAATGCTCATTCTTCTTACGAGAATCTGGCGCAGACTCTGG
AAGATATGTTCTTTCGCTCTAAACCGGGTACTATCGGGTTAACGGGTCAGTTCACCAAACCGTTGAGGCTTTTAGATGGATCTTCT
GAGTTTGTACTTACTTATGAAGACAAGGAAGGAGACTGGATGCTTGTTGGTGATGTCCCATGGAGAATGTTTACCACCTCGGTGAA
AAGGCTTAGATTGATGAAAACCTCTGAAGCTAATGGACTCGCTGCAAGGCATCAAGAACTGAACGAGAGACAAAGAAAGCAACCGG
TTTAGTTCTCTTTTCGACATTACGTTGTTACAGGTTTTTATTTTGTGGGGTTTTTGAAGCATGCATAAGGAAGAACACAGAAGCTA
GATTGATCTTATCAAGTTTGTGTATGTTTCTTGGTTCTTCTAATGGTTTTTTCTTTAGTTTTTTCTTTCTTTTCTTTGGCTGCCGT
CTTTTTATTTTACTGTTTGTGATTTCATCATATACTATGGAAGAGAATGCTCTTTATTTCTTTTACCACACTGTAAATATTTGAAG
CTTATCTTTTTTTTTTGTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_850205 auxin-responsive protein IAA13 [Arabidopsis thaliana]11241e-120
NP_180889 auxin-responsive protein IAA13 [Arabidopsis thaliana]11089e-119
BAJ34122 unnamed protein product [Thellungiella halophila]11024e-118
XP_002881274 indoleacetic acid-induced protein 13 [Arabidopsis lyrata subsp. lyrata]10845e-116
ADB93620 indole-3-acetic acid inducible 13 [Arabidopsis thaliana]9691e-102

Swiss-Prot top hits (Blast detail)Scoree value
Q38831 Auxin-responsive protein IAA1311245e-122
Q38830 Auxin-responsive protein IAA127804e-082
Q38829 Auxin-responsive protein IAA114202e-040
A2XB18 Auxin-responsive protein IAA104141e-039
Q0DWF2 Auxin-responsive protein IAA104141e-039

TrEMBL top hits (Blast detail)Scoree value
Q0WU05 Auxin regulated protein11248e-121
D3K0G2 Indole-3-acetic acid inducible 13 (Fragment)9581e-101
B9SQS7 Auxin-responsive protein IAA13, putative4681e-044
A9PCE3 Putative uncharacterized protein4411e-041
B9HSU7 Predicted protein4411e-041

Arabidopsis top hits (Blast detail)Scoree value
AT2G33310.2 IAA13; transcription factor11254e-123
AT2G33310.1 IAA13; transcription factor11093e-121
AT2G33310.3 IAA13; transcription factor11093e-121
AT1G04550.2 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor7813e-083
AT1G04550.1 IAA12 (AUXIN-INDUCED PROTEIN 12); transcription factor/ transcription repressor5091e-051

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  100%

Unigene MembersMember information