 |
Information for unigene UN40840
| FASTA Sequence |
| Unigene ID: UN40840 | Length: 813 |
SSR | | GGAAACCAAAGCAGAGAACTACGCAAACGACACCGTCTTACAGCAAAAAGATGCTTTCTTCTTCTCCAACCTCCTTCGCTAGTCCA
TTCCTCTCCACGTCTCCCCCTCTCTCCCCCGTATCTCCTCCGTCTCGCTCCGCCCGTATCTCGCCTCCTCCCGTCTCCGCCTCTTG
CTCATACACCTGCACGGAGGACGCCCCGCGGCTGCACCAGATCCCGCTGCGTTTGACGACGACGGCGAACGCTTCTCTCTACGAGA
TCCTGGAGGTTCCTCTCGGCGCGACGAGCCAGGATATCAAATCTGCTTACCGGAGACTGGCCAGGATCTGCCATCCAGACGTGGCG
GCGGGAACCGATCGGACGAGTTCTTCTTCTTCTTCTGCGTCGTCGGCCGATGAGTTCATGAAGATTCACGCGGCTTACTGTACGCT
TTCTGATCCCGAGAAACGATCTGTATACGATCGGAGGATGCTTCGTCGGAGCAGGCCTTTGACCGTTGGTAACTCGGGGATGGGCG
GTTACGTTGGCCGGAACTGGGAAACAGATCAGTGCTGGTAGCGAGTTCACTCGGTGACCGAGTTAACCCGCGTTAATTTGAATTTA
AGAAAAAGATGAATCGGATTTGTATAAATTAAAATAGGAAACGATAAATCTGGAGCTTGCTTGACGTTGTAATTAGTAGTAAGTCA
TTAAGCTAACACGGACGAGGATTTTAGTGTGTGCTAACATATGCTATACGGCGCCGCTTGGTTCGTGTTACGTAGGATCTACGTGT
GTTTTTTTTACCTTGTGAATCCTATACTAGTCATCAATG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34233 unnamed protein product [Thellungiella halophila] | 737 | 6e-076 |
| XP_002867039 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis lyrata subsp. lyrata] | 734 | 1e-075 |
| NP_195328 chaperone protein dnaJ 11 [Arabidopsis thaliana] | 729 | 5e-075 |
| CAC03599 J11 protein [Arabidopsis thaliana] | 727 | 9e-075 |
| NP_179378 DNAJ heat shock N-terminal domain-containing protein [Arabidopsis thaliana] | 533 | 3e-052 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9FYB5 Chaperone protein dnaJ 11, chloroplastic | 729 | 2e-076 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q1H544 At4g36040 | 729 | 3e-075 |
| O48828 At2g17880 | 533 | 2e-052 |
| B9S6N6 Chaperone protein dnaJ 11, chloroplast, putative | 371 | 1e-033 |
| C6T675 Putative uncharacterized protein | 340 | 4e-030 |
| P93499 DnaJ-like protein (Fragment) | 336 | 1e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G36040.1 DNAJ heat shock N-terminal domain-containing protein (J11) | 730 | 2e-077 |
| AT2G17880.1 DNAJ heat shock protein, putative | 554 | 4e-057 |
| AT5G25530.1 DNAJ heat shock protein, putative | 132 | 4e-008 |
| AT1G77930.1 DNAJ heat shock N-terminal domain-containing protein | 131 | 5e-008 |
| AT1G77930.2 DNAJ heat shock N-terminal domain-containing protein | 131 | 5e-008 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
