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Information for unigene UN40862
| FASTA Sequence |
| Unigene ID: UN40862 | Length: 724 |
SSR | | GGACACACACTCATCATCGCCGTGCTTTACAGCTTCTTCTTCTTCTTTAGTCTTTCCCTTTCTTTTTTTTGCTTATATCTTCAGCA
AATCTGATTTCAAGAGAATTAAAAAAAAATCACCGACGAAAGAAAAAAGAATGAGTGAGGGGAGGATAAAGAAGAGTGTGAACGGA
GGAGCACCGGCGCAGACGAATCCCGATGATCGGAGATCTAGTGTTGAAGTTCCTCAAGCGGCGGCGGGGAAGCGAGCTGTAATAAA
GAGTGCTGATATGAAAGAGGATATGCAGAAGGAGGCTATCGATATCGCTATCGCCGCATTTGAGAATAACAGTGTGGAGAAGGATA
TAGCTGAGAATATAAAAAAGGAGTTTGACAAGAAACATGGTGCTACTTGGCATTGCATTGTTGGTCGCAACTTTGGTTCTTACGTA
ACTCACGAGACAAACCATTTCGTTTACTTTTACCTCGACCAAAAAGCTTTGCTGCTCTTCAAGTCGGGTTAAAGAATTCCGAAACC
AAGAGAGCTTCCTTAAACTCTTTGGAGGCTGGAGATGTTAAATCGCATTATTGTCATCACGTTGTAGTTAGTTCCTTCCTTGTGTT
CTACGCGTATGTATGTGTTCGCTTTCACCAACAAAACTGGATTATAAACACTGTATGTAATATTCGATTTTAAAACTCTATTTTCA
GAAAACCGAAATTTCCGGTTTGTATTTGCTCCTGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002870199 At4g15930 [Arabidopsis lyrata subsp. lyrata] | 529 | 6e-052 |
| NP_193328 dynein light chain LC8-type [Arabidopsis thaliana] | 527 | 1e-051 |
| XP_002328627 predicted protein [Populus trichocarpa] | 445 | 3e-042 |
| CAB46031 dynein light chain like protein [Arabidopsis thaliana] | 436 | 4e-041 |
| AAL57365 neuronal nitric oxide synthase protein inhibitor [Arabidopsis thaliana] | 433 | 8e-041 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39580 Dynein 8 kDa light chain, flagellar outer arm | 335 | 9e-031 |
| Q3MHR3 Dynein light chain 2, cytoplasmic | 335 | 9e-031 |
| Q96FJ2 Dynein light chain 2, cytoplasmic | 335 | 9e-031 |
| Q9D0M5 Dynein light chain 2, cytoplasmic | 335 | 9e-031 |
| Q78P75 Dynein light chain 2, cytoplasmic | 335 | 9e-031 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q84VW0 At4g15930 | 527 | 7e-052 |
| A9P9B8 Predicted protein | 445 | 2e-042 |
| O23442 Dynein light chain like protein | 436 | 3e-041 |
| Q8W1X1 Neuronal nitric oxide synthase protein inhibitor | 433 | 6e-041 |
| A5BC89 Putative uncharacterized protein | 424 | 6e-040 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G15930.1 microtubule motor | 528 | 4e-054 |
| AT5G20110.1 dynein light chain, putative | 193 | 3e-015 |
| AT4G27360.1 dynein light chain, putative | 182 | 5e-014 |
| AT1G23220.1 dynein light chain type 1 family protein | 179 | 1e-013 |
| AT1G52240.2 ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | 176 | 2e-013 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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