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Information for unigene UN40897

FASTA Sequence
Unigene ID: UN40897Length: 1344 SSR 
GGGAACAAAACAAAACAAGTCTGTAAAGGAAAACAAAAAGATAAAAACCCGGAAAATTCAGTTATTTCACATTTCGCCGCTAAGAT
TCTGTTTCTGAACATCTTAGACACTCACGCTTGTGTAAGCCGCCATGTGTGGAGGAGCTATAATCTCTGATTTCATTCCGTCGCCA
AGGTCTCGCCGCGTCACCAGCGAGTTCATCTGGCCAGATCTGAAGAAGAAGAAGAAGAACGCGAAGGGACTGAAGAAGAGCTTGGA
GAAGCGTTCGAGTCACTCTGATCTTGATGATGAGTTCGAGGCTGATTTCCAGCGTTTCAAGGATGATTCGTCTGTTGATGACTTCG
ATGATGTATTCGCCGATGTGAAACCGTTTGTTTTCACGGCGACTCCGAACGCCGCCGTCTCCTCCTTGGCTGCCGCTCCTGGCAAG
AAAGTTACTGACTCTAACGGACAAGCTGCAAAGAGGAAGAGGAAGAGCCAATACCGAGGGATAAGGCAACGTCCTTGGGGCAAATG
GGCTGCTGAGATCCGTGATCCTAAGGAAGGTTCAAGGATCTGGCTTGGAACTTTCTCAACAGCCGAGGAAGCTGCGAGAGCTTATG
ATGCTGCAGCACGCAGAATCCGCGGCTCCAAAGCTAAGGTGAACTTCCCAGTGGAAACCCTTACTGTCTCTCACAAACCAGTGGCT
AAACCTAATCCGAACCCAGCTTCGGTTCAGAACTTCGACAACACGTGTTTCATGGAGGACACACAGCAAGGGAACAACAACAACAA
TCAGTTTGCGCTGACAAACTCTATTGATGCTGGAGGTGGTAGTGGATATCATCAGTATTTCAGCTCAGACCAGGGTAGTAATTCAT
TCGGTTGGAGCGATCAAGCTCCAATAACTCCTGAGATATTTTCTGCGTTTATCAACAACAACAACTCTGCTCTGTTCGTGGAGGAT
GCAAATCCAGCTAAGAAGCTCAACTCCATGGATTTTGAGACACCTGAATGGGACTCTTCACTTGGTTTCCTCAGTGGAGATGCTGT
GGTGACTGAGGAAAACGGTGCAAACCCTATAGAGTTATGGAGCATTGATGAGATCGAGTCCATGATCGGAGGGGTCTTCTAAAAAG
ATACATTTTCATGTAAATAAGGCTGCATGTTAGTGAGTTTCCCGCATCATCATCTCCTTTAAACCTGCAAAACAATTTAAGATCTG
TTACTTTTGTTTCATCTTCTTGCTGTATATGTCTATCTGAGGAGCTGCTGTTGGGGAATGGTTGTAAGCCTATTTAACTTTGCATG
CTAATAAGGTTGTGATGAAGTTCATATAGGGGCTTAATTTTCAGGAGTTTCCGT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34297 unnamed protein product [Thellungiella halophila]12282e-132
AAM65746 AP2 domain containing protein, putative [Arabidopsis thaliana]7219e-074
NP_175794 ethylene-responsive transcription factor RAP2-12 [Arabidopsis thaliana]7173e-073
XP_002891780 hypothetical protein ARALYDRAFT_892441 [Arabidopsis lyrata subsp. lyrata]6448e-065
NP_001077718 ethylene-responsive transcription factor RAP2-12 [Arabidopsis thaliana]5901e-058

Swiss-Prot top hits (Blast detail)Scoree value
Q9SSA8 Ethylene-responsive transcription factor RAP2-127171e-074
Q6K7E6 Ethylene-responsive transcription factor 14015e-038
Q9LUM4 Ethylene-responsive transcription factor RAP2-23504e-032
P42736 Ethylene-responsive transcription factor RAP2-32993e-026
O22259 Ethylene-responsive transcription factor ERF0712878e-025

TrEMBL top hits (Blast detail)Scoree value
B9DG10 AT1G53910 protein7172e-073
A8MRC0 Uncharacterized protein At1g53910.35901e-058
Q3L0R1 Ethylene-responsive element binding protein ERF25782e-057
B9T4R8 Ethylene-responsive transcription factor, putative5764e-057
Q3KZ43 Putative ethylene responsive element binding protein5569e-055

Arabidopsis top hits (Blast detail)Scoree value
AT1G53910.1 RAP2.12; DNA binding / transcription factor7171e-075
AT1G53910.2 RAP2.12; DNA binding / transcription factor7171e-075
AT3G14230.2 RAP2.2; DNA binding / transcription factor6417e-067
AT3G14230.3 RAP2.2; DNA binding / transcription factor6311e-065
AT1G53910.3 RAP2.12; DNA binding / transcription factor5905e-061

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  75%
 
61  25%

Unigene MembersMember information