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Information for unigene UN40905
| FASTA Sequence |
| Unigene ID: UN40905 | Length: 721 |
SSR | | GGAATGATTTGCTGATGTTAAAAAAAATTACTGTATTTGATTTGACAGAACATGAAGGTAAAAGTGTTTTTTTTTTTTTTATGAAG
GCTAAATTGGGCTATTTGTTTGGCCCCTCTCACAACATCGCACGGATCCAAATCCAGATCATACCGAAGAAGAAGAAGACACGCAC
CATCCATCCATCCATCCATCTCCAAGAGGGAGCTTTGGTTTGAATCTGAATTTGATCAAAAAATGGGTTTCCTGATAACAAGCCTA
ATCTTCGTGGTCGTTGGGATAATTGCTTCTCTTTGTGTTCGAATCTGCTTCGCTAGAGGTCCCTCCACAAATCTGCTTCACTTCAC
CTTGGTCATTACTGCCACGGTCTGCTGCTGGATGATGTGGGCGATTGTATACATTGCACAGATGAATCCTCTGATTGTCGCAATCC
TAAGCGAAACAGAGTAGCATCCTCTCACTCAAACTCACTCAGACTATGCGCAAAAGTGAGTAGTAATACCGGGTTGCTTACCTTCC
TTCTTCTGTTTTCGATTCTTGTGTATCTTCAATCTTTTAAATGGTTTGTATTTCTGTTTCCTAGTGTGTGAACAAATCCATAAACT
TTTTGCCTCTGTATTATTTAAAATTCCATGTATTCTATTCCCAAAACAAGCTGAGATCCTCAAAACAATGTATTTGTTGATGAAAT
AATGTCTTTGACAGTGAGGGACGAGTTTTATTC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_568823 ATPase, V0 complex, subunit E [Arabidopsis thaliana] | 332 | 4e-029 |
| XP_002866085 ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata] | 325 | 3e-028 |
| NP_194401 ATPase, V0 complex, subunit E [Arabidopsis thaliana] | 315 | 4e-027 |
| XP_002869594 ATP synthase subunit H family protein [Arabidopsis lyrata subsp. lyrata] | 312 | 9e-027 |
| XP_002317354 predicted protein [Populus trichocarpa] | 310 | 2e-026 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9FLN5 AT5G55290 protein | 332 | 3e-029 |
| Q9SZ13 Putative uncharacterized protein | 315 | 3e-027 |
| A9P8S8 Predicted protein | 310 | 1e-026 |
| Q8GUB2 Vacuolar ATPase subunit e-like | 308 | 2e-026 |
| A9P9Z7 Predicted protein | 301 | 1e-025 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G55290.1 ATP synthase subunit H family protein | 333 | 1e-031 |
| AT5G55290.2 ATP synthase subunit H family protein | 333 | 1e-031 |
| AT4G26710.1 ATP synthase subunit H family protein | 316 | 1e-029 |
| AT4G26710.2 ATP synthase subunit H family protein | 316 | 1e-029 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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