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Information for unigene UN40942

FASTA Sequence
Unigene ID: UN40942Length: 1006 SSR 
GGGTTGACCTTCCCTTGAGTTTAATTGGACTTTCGAGAGGTAATAAAAGAGAAGAAGAAGAAGATCGTCGTAAACTCCCACGATGT
CGATTAGAGGAGGAAGACTCGTTGCTTTCTCGCCGATTCTGGCGGCGGTGCTGTTCCTGCTGACGGTTAACCACGGCGAAGCCATA
TGGTTGACGATTCCGCCGACGGGAGGGACGAAGTGCGTCTCGGAGGAGATACAGAGCAACGTCGTCGTTTTGGCTGATTACTACGT
CGTCGATGAGCATGATCCTGAACACACGGCTACTATTTCTTCTAAGGTAACATCTCCTTATGGGAACAATATGCATAACCAAGAGA
ATGTGACGCGTGGTCAGTTTGCGTTCACAACTCAAGAAACTGGGAACTACTTGGCTTGCTTCTGGGTTGATTCCAGTCGTCCGCAA
GCTAATCCACTGACCCTTGGGATTGATTGGAAGATTGGTATCGCAGCCAAAGATTGGGACTCTGTTGCTAAAAAGGAAAAGATCGA
GGGTATTGAGCTTCAGTTGAGGAGGCTTGACGGGTTAGTGCAGTCCATTCGTGAGAACATCAATTATATAAAAGACAGGGAAGCCG
AGATGAGAGAAGTGTGTGAGACAACCAACTCAAGCGTGGCTTGGTTCAGTATAATGTCACTCGGGGTTTGCCTTTGCGTTGCGGGT
TCACAGATATGGTACCTGAAGCGATATTTCCACAAGAAGAAACTCATTTAAAGACTTGGTCTGAAGGAACTTACTATATATATAGT
AACACATCCCCACCCTGAAAAGAGGGGATAAGCAGAGTCAATTGGTTTTAAATGGAAGAACGCATTTTCATTTTTTTCTTTCTGTG
GAACATCATAACGGTAGTTGAGTTTGTTGTGCACAGATCACTTTGTGTTTTGATTGATCTCTGTTGGAGTAGGAAAACGGAGTTAT
GTGACAATGTACCAAAGCAATTATCCTTTATCTAGAAATATGAAACGTTTACGAATTTAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002893188 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata]9393e-099
NP_173608 emp24/gp25L/p24 family/GOLD domain-containing protein [Arabidopsis thaliana]9278e-098
XP_002513789 Transmembrane emp24 domain-containing protein 10 precursor, putative [Ricinus communis]7413e-076
XP_002889759 emp24/gp25L/p24 family protein [Arabidopsis lyrata subsp. lyrata]7002e-071
ABK94032 unknown [Populus trichocarpa]6931e-070

Swiss-Prot top hits (Blast detail)Scoree value
Q63584 Transmembrane emp24 domain-containing protein 103314e-030
Q9D1D4 Transmembrane emp24 domain-containing protein 103234e-029
O35587 Transmembrane protein Tmp213216e-029
Q5E971 Transmembrane emp24 domain-containing protein 103181e-028
Q28735 Transmembrane emp24 domain-containing protein 103181e-028

TrEMBL top hits (Blast detail)Scoree value
Q8RWM6 Similar to transmembrane protein9275e-098
B9RJ70 Transmembrane emp24 domain-containing protein 10, putative7412e-076
A9PCC9 Putative uncharacterized protein6937e-071
B9GU57 Predicted protein6937e-071
Q6IDL4 At1g095806911e-070

Arabidopsis top hits (Blast detail)Scoree value
AT1G21900.1 emp24/gp25L/p24 family protein9282e-100
AT1G09580.1 emp24/gp25L/p24 family protein6926e-073
AT1G57620.1 emp24/gp25L/p24 family protein6334e-066
AT3G10780.1 emp24/gp25L/p24 family protein4883e-049
AT1G26690.1 emp24/gp25L/p24 family protein4166e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
64  100%

Unigene MembersMember information