Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN40954

FASTA Sequence
Unigene ID: UN40954Length: 1209 SSR 
GGATTATAGTCTGACGTCTCTAGCTTACGTGAAAGAGAAGAATTGTTCAAAGAGAGAAAGAAGAGATCATGGATCATCATCAACAA
CAACTCTTCTCTCTCTGCTCAGTTTCATACGTCTTCAACATCAAGAAACATTTCTTCGTCAGCCTCTTTTCACTTACCGTCCTCAT
ATTCTCCACCGTCGTCATCCTCAACCTCGTCGAGTCTTCCTCCTTCGAGCCCCTTCTCCGTTTCGGATTGTTTTCGCCCTCGTCGC
AAAACTTAACAAAGGATTGTGATTACTCCAAAGGAAGATGGGTTCGTCGAACATCATCATCATCATCATCATTAATGTACGGTGAA
GAGTGTCGCTTTCTTGATTCAGGGTTTCGCTGTCGGAAGAACGGAAGAAAGGATTCCGGTTATCTAGATTGGCGATGGCAACCACA
CGGCTGCGATCTCCCACGAGGATCATACTTTGAAGAGGGAAGGAAAGTGAACAAGACAATGGGAGCGATGGAGGCGTTTGGGAAGT
CTTTAAAGACATGGAAGTCATGGGTTTTAGAGAAACTTGATCCTGACAAGACTTATGTCTTCTTCAGAAGCTACTCTCCAGTGCAT
TACAGAAATGGGACATGGAATTTTTGTGGTCTGTGTGATGCAGAGACTGGTCCTGAGAGTGATAAAAGGAGAATGGAACCTGATGC
GGCTCACAACAGATATATCTATGAAGTGATTGAAGATATGAGATATCAACACAGTAAGGTTAAGCTTCTCAACATTACATATCTGA
CAGAGTTTAGGAAAGATGGTCATCCTTCTCGGTACCGAGAGGGTGGTACTCCTGTTGATGCTCCACAAGACTGCAGCCACTGGTGC
TTACCAGGCGTACCTGACACATGGAATGAGATTCTCTATGCGCAACTCTTGTCAATGAATTATAGAACAAAATGAGGTTCAACCTT
TAGGATCAAGAAATGGGGGAAAAAGAAAAAAAAGAGCAAAAGCAAGTACAAAGAGAAAGGCATCACCCCAAGCTTGGCACATATTT
CTGAATTGCAGCAAGCATAGGCTAGATTAGTTCATTAACACAGACACACTGCCAGTGACAGTTGTAAATGTAACGATGGAGAGATT
CATGTTGACATGATTTTGTACAAAGCAACCATCAATACATCAGTATAGAAGTTCTGAAAGTCAATGAATAAAGAGGAGAGAGCTTG
CACCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568164 protein trichome birefringence-like 9 [Arabidopsis thaliana]7908e-082
NP_974739 protein trichome birefringence-like 9 [Arabidopsis thaliana]7908e-082
BAD44102 hypothetical protein [Arabidopsis thaliana]7235e-074
NP_187764 protein trichome birefringence-like 8 [Arabidopsis thaliana]7235e-074
XP_002530524 conserved hypothetical protein [Ricinus communis]5604e-055

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9ASZ0 AT5g06230/MBL20_117906e-082
Q9FFZ4 Gb|AAF00670.17906e-082
Q67YU7 Putative uncharacterized protein At3g11570 (Fragment)7233e-074
Q9CAX1 Putative uncharacterized protein F24K9.247233e-074
B9SX05 Putative uncharacterized protein5603e-055

Arabidopsis top hits (Blast detail)Scoree value
AT5G06230.1 unknown protein7912e-084
AT5G06230.2 unknown protein7912e-084
AT3G11570.1 unknown protein7241e-076
AT5G06700.1 unknown protein3729e-036
AT3G12060.1 unknown protein3648e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  67%
 
61  33%

Unigene MembersMember information