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Information for unigene UN40955
| FASTA Sequence |
| Unigene ID: UN40955 | Length: 1629 |
SSR | | GTGGTTCGTCCTCGTGCTACAGCTGCTACTCGGTTTCCTGGGAAGTCAAACGAAGAAGCGGCTGCAGTATTGATTCAGACTATCTT
TAGAGGCTATTTGGTATGTTCTCATTATACACTTCCACGTCCTTGGAACCAAGCCTTATTGGCTTTGTTTGGTTGGCTTTGCAGTT
CCTGCTTATTAAGTTTCTTGGTCGGATTATATAACTCTTAATCTTGTTGTGTAATACAGGCAAGAAGAGCAATGAGGGCAATGAGG
GGTTTGGTCAGACTTAAGTTATTGATGGAAGGATCTGTTGTTAAACGTCAAGCTGCAAATACTTTAAAATGTATGCAGACTCTCTC
CCGTGTTCAGTCACAGATCCGAGCTAGGAGAATCAGGATGTCCGAAGAGAATCAGGCTCGCCAGAAACAACTCCTCCAGAAGCATG
CCAAAGAGCTTGCTGGCTTCAAGGTCTCTCTCTCTCTCTCTCTCTCAGTTTTTTTAAGCATTACTATTCACAATGTCATAACTGAT
GCATAGTTGCCTACTGACACCATTAATCAATTATCATTTGAGTCTTGTTGGCTTATGCTAATTATAGTTTCTCTATTGCTACTCTC
TCAGAACGGGGATAACTGGGATGATAGCATTCAATCAAAGGAAAAAGTTGAAGCAAAATTGCTGAGCAAGTACGAGGCTACTATGA
GAAGGGAAAGAGCATTGGCCTATTCATACTCTCAACAGGTATTATTCCAATTAATGTAACCTATTGCTTGAAAAGGGAACTCATAC
ATACATTAGAGTTGGATATATAGTTTGTTTGAATGTTGTGATGAGTCTCATATGTTCATGTTTGCACAGCAAAACTGGAAGAACAA
TTCTAAATCCGGAAACCCTATGTTCATGGATCCGAGCAACCCGACATGGGGCTGGAGCTGGTTAGAGAGATGGATGGCTGGTCGGC
CATTAGACAACAACAGTTCCGAGAAAGAACAAAACAACGACAATGCTGCCTCGGTCACAAAATCTATAAACCGCAAGAACACAACA
CAACCAAACACACCATCATCCGCAAGAGGTGGTGGTGGTGGTACACCAAGAAACAAAAACAGTTTCTTCTCTCCTCCAACTCCCTC
GAGACTAAACCCTTCCTCCGGAAAATCTAAAGACGAGGACGACGACGCCAAAAGCACAATCTCGGTTCTGTCCGAGAGGAACCGTA
GACACAGCATCGCTGGTTCGTCAGTAAGAGACGACGAGAGCCTTACCTGCTCGCAGACTCTCCCGAGCTATATGGTTCCGACTAAA
TCAGCTAGAGCCAGAGTCAAGCCGCAGAGTCCATCAAGTGGTGGTGGTGGTACCACACAGCAGGAGAGGGATGGCTTTGCAGACAA
GGAGGGATCATCGGCTAAGAAACGCCTCTCTTATACGACGAATTCACCTGCATTGCCTAAACCAAGACGGTTCTCAGCTCCGCCTA
AGGTGGAGAGTTGCAGCGTCGCCTTGACCAATGGAGTAGTAGCTGAAGGTATTTACTATTTTAATTCATTTGTGCAGCATTTGTAA
GCGCCTGTCATTTATTTATTTTACTACAAAAAATTATTATTCGAACAACGATAAATTCATGTATTTTTTGTTTTGTTTTTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568110 protein IQ-domain 2 [Arabidopsis thaliana] | 815 | 2e-084 |
| XP_002873072 IQ-domain 2 [Arabidopsis lyrata subsp. lyrata] | 792 | 7e-082 |
| CAB86071 putative protein [Arabidopsis thaliana] | 682 | 4e-069 |
| BAJ34352 unnamed protein product [Thellungiella halophila] | 306 | 2e-025 |
| NP_001189848 protein IQ-DOMAIN 1 [Arabidopsis thaliana] | 298 | 1e-024 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93ZH7 AT5g03040/F15A17_70 | 815 | 1e-084 |
| Q9LYY1 Putative uncharacterized protein F15A17_70 | 682 | 3e-069 |
| B9IJ09 Predicted protein | 277 | 3e-022 |
| B9SGQ6 Calmodulin binding protein, putative | 268 | 3e-021 |
| B9MT91 Predicted protein | 260 | 2e-020 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G03040.1 iqd2 (IQ-domain 2); calmodulin binding | 815 | 6e-087 |
| AT5G03040.2 iqd2 (IQ-domain 2); calmodulin binding | 815 | 6e-087 |
| AT3G09710.1 IQD1 (IQ-DOMAIN 1); calmodulin binding | 341 | 5e-032 |
| AT3G52290.1 IQD3 (IQ-domain 3); calmodulin binding | 217 | 1e-017 |
| AT2G26180.1 IQD6 (IQ-domain 6); calmodulin binding | 188 | 3e-014 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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