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Information for unigene UN40968

FASTA Sequence
Unigene ID: UN40968Length: 743 SSR 
GGACTGAAAGATAGCTTTCTCTAATTTGGGCAGATTCTCTCTAGATTTTCCTCGGCTCATCTCTCGTCTCTCTCTCTCCGCGATCA
GATCGCAAAACCAAAATCGGATCGAATCCACGAGTTTGATCAAATATGACCCTTGGCTCCGGAGGGACGAGTGTCTTTGTACCGAG
GAATTTCCGGCTGCTGGAGGAGCTTGAACGTGGGGAGAAAGGTATTGGAGATGGAACTGTTAGCTATGGAATGGATGGTGGTGATG
ACATTTACATGCGCTCTTGGACTGGCACTATCATCGGTCCTCACAACACCGTTCATGAAGGTAGGATCTATCAGTTGAAGCTCTTT
TGTGACAAAGATTACCCTGAGAAACCTCCCACTGTCCGGTTCCATTCACGTATCAACATGACTTGTGTCAATCATGAAACAGGAGT
TGTGGATCCCAAGAAGTTCGGTCTTCTTGCTTGCTGGCAAAGGGAGTACACAATGGAAGATATACTGGTACAGCTGAAGAAAGAAA
TGACTGCCTCGCATAACCGTAAGCTTGTTCAACCTCCAGAAGGCACTTGCTTCTAGTAGCTTCTGAAATCTTCTTCTGCTTTGCTT
AAAAAAGTTTTTGCCCCCTTCTAACACTAAAGTATGTATCTGGGGGTAATCCATTGTCGTTCTCAAGCTTTTTATGATTAAAAATG
GTCTGTTCGATTGATCATCTGAAGTTTCACTGTTTAATCCATCTGTGTTCAATCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566968 ubiquitin-conjugating enzyme E2 variant 1D [Arabidopsis thaliana]7545e-078
XP_002881424 hypothetical protein ARALYDRAFT_482581 [Arabidopsis lyrata subsp. lyrata]7412e-076
XP_002323400 predicted protein [Populus trichocarpa]7384e-076
ADU56174 ubiquitin-conjugating family protein [Jatropha curcas]7358e-076
XP_002309399 predicted protein [Populus trichocarpa]7331e-075

Swiss-Prot top hits (Blast detail)Scoree value
Q9SVD7 Ubiquitin-conjugating enzyme E2 variant 1D7542e-079
Q9SJ44 Ubiquitin-conjugating enzyme E2 variant 1C7085e-074
Q93YP0 Ubiquitin-conjugating enzyme E2 variant 1A5761e-058
Q9CAB6 Ubiquitin-conjugating enzyme E2 variant 1B5714e-058
Q54D06 Probable ubiquitin-conjugating enzyme E2 variant4504e-044

TrEMBL top hits (Blast detail)Scoree value
A9PBP9 Predicted protein7383e-076
A9PCP1 Predicted protein7331e-075
C8CP48 Ubiquitin-conjugating enzyme variant7312e-075
Q3HVN0 Ubiquitin-conjugating enzyme family protein-like protein7293e-075
B3TLV8 Ubiquitin-conjugating enzyme family protein7284e-075

Arabidopsis top hits (Blast detail)Scoree value
AT3G52560.1 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase7552e-080
AT3G52560.2 UEV1D-4 (UBIQUITIN E2 VARIANT 1D-4); protein binding / ubiquitin-protein ligase7434e-079
AT2G36060.1 ubiquitin-conjugating enzyme family protein7094e-075
AT2G36060.2 ubiquitin-conjugating enzyme family protein7022e-074
AT2G36060.3 ubiquitin-conjugating enzyme family protein6933e-073

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
84  100%

Unigene MembersMember information