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Information for unigene UN40977
| FASTA Sequence |
| Unigene ID: UN40977 | Length: 1010 |
SSR | | GGATAGACAGAGCGCGTATACAAGTCTCCCGCTCTCTCTCTCCGGCAACCCGTCACAAAAGTTTCAGTCTTTTTTTATCCGGTACG
GTCTGGAATTAGGACGAAACCCTAACTGTTTCGAGAGATTGCGATTTTAAAACATTGAGCAAGCAAATGAAAGGGATAGGGAGGAT
TGTGAACTCTCTCTCCGAATCCTTCTTCTCTCATGTTCTATCCTGGAAAGCCAGTCATGGAGGTTGGAAGTGCTGATTTTCCTAAC
GTTCGTTCAGCTTTAAATTCTCCATTAGCCAAGTCCATTTACTCCATCGATGGTGTGGTTCGAGTTTTCTTTGGGTCTGATTTTGT
CACTGTCACCAAGTCAGATGATTTATCATGGGATATACTCAAGCCTGAGATATTTGCAGCTGTCATGGATTTCTACTCTTCTGGTC
AGCCTCTGTTTCTCGACTCGCAAGCTGCTGCTGCCAAGGATACTGCTATTAACGAGGATGACACTGAAACCGTGGCAATGATCAAG
GAACTTTTGGAAACACGCATCAGACCAGCAGTCCAAGATGATGGTGGGGACATTGAGTATTGTGGGTTTGATCCTGAAAGCGGAAT
AGTGAAGCTGAGGATGCAAGGAGCTTGTAGCGATTGTCCAAGCTCATCTCTTACATTAAAATCTGGAATAGAAAACATGCTCATGC
ATTATGTACCCGAGGTGAAAGGTGTAGAACAAGAGTTCGATGGGGAAGAAGAGGAGGGAACGTTGTCTGGAGAGGTGAGAGAGTAG
AGTAAGACGTCTCCTCAAGCTTCTCTCTCCTCTTTTCCTCAATTAGTGTACAGAAGAATAAATTCCAGTGAGTGAGTGAGTGAGTG
CACTCTTTTCTGTCACTCTTTGAGTTGATTTGTTGGTGTTTTGGGGCTTTTGAATTACAGTCAAGAATGTTCTGAGAGATCAATAG
TTGATCTGGTTTGTAACATTTGTTAACCTACATGAATAAGTTTTTTGAATGGTTTCTTGCAAGC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_566673 NifU-like protein 4 [Arabidopsis thaliana] | 958 | 2e-101 |
| NP_175550 NifU-like protein 5 [Arabidopsis thaliana] | 869 | 4e-091 |
| XP_002891637 hypothetical protein ARALYDRAFT_892107 [Arabidopsis lyrata subsp. lyrata] | 868 | 6e-091 |
| XP_002524990 HIRA-interacting protein, putative [Ricinus communis] | 864 | 2e-090 |
| XP_002264979 PREDICTED: similar to NFU4 (NFU domain protein 4) [Vitis vinifera] | 861 | 4e-090 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LIG6 NifU-like protein 4, mitochondrial | 958 | 9e-103 |
| Q9C8J2 NifU-like protein 5, mitochondrial | 869 | 2e-092 |
| Q9QZ23 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 547 | 4e-055 |
| Q9UMS0 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 545 | 7e-055 |
| Q8SY96 NFU1 iron-sulfur cluster scaffold homolog, mitochondrial | 544 | 9e-055 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9SG71 HIRA-interacting protein, putative | 864 | 1e-090 |
| B9HVY4 Predicted protein | 851 | 4e-089 |
| C5Z0J5 Putative uncharacterized protein Sb09g004310 | 837 | 2e-087 |
| B8R1J6 Iron-sulfer cluster scaffold protein NFU4 (Fragment) | 832 | 6e-087 |
| B4FCD0 Putative uncharacterized protein | 830 | 1e-086 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G20970.1 NFU4; structural molecule | 958 | 8e-104 |
| AT1G51390.1 NFU5; ATP binding / structural molecule | 869 | 2e-093 |
| AT3G20970.2 NFU4; structural molecule | 679 | 2e-071 |
| AT5G49940.1 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 152 | 2e-010 |
| AT5G49940.2 NFU2 (NIFU-LIKE PROTEIN 2); structural molecule | 152 | 2e-010 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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