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Information for unigene UN40979
| FASTA Sequence |
| Unigene ID: UN40979 | Length: 846 |
SSR | | GGTTCTAACACTAAAAGAACGAAGATAAAGGAAAATCTCTACATCAAATGTATGAGGACAAAAAAAAAAATTGCACGAGGACCAAA
AAAAGACAAGAGTGGTCACAGCACAACAAGAAATAACATCATATATATATATACTTTCACAAGGTACCACAACACATGTTCTCTAA
GGTTGTGTATGTGGGACTTGTCCATTATTAGTCTCCGACCTGGATGGTTTGTCCATAACCATACACAATCTATTTATAAACGGATT
TTCGCAGTACCAAGCACCCATTAGAAATATGTCCTTTACCATTGACTAGATCAGCAAGTCTCAAAAGGCGTATATCTCAAAAAGGC
TTAGGCGCTGTGCCGGCCAAAATGTTTTTGTTTGGACCTTTTTTCTGGCAACCTAGCTCCGGTCTTGGCATCCTTAAACGGGTCGG
TCTGAGTTGGTTTTCCCAAGTTGTCCTGAAGTTGCTGCAACGCACGGACCACTTGGTCCATGGTCGGACGCGCCTTGGGTTCCAAC
GAGAGACACTGAATCGCAATGCTAGCCAATCTCACCGCCTCTTCGGGTAAGTACTGTGTGTCTAGCCGAGCGTCCACGATTTTGAG
AACCTTGCTTTTGCTTGCGAAGTAGGGTCGAGCCCATTCCACGAGGTTTTCTTCTTTCGCGGGCCTGTTCTCGTCCAACGCTTGTT
TACCCGTCAAAATCTCTAAAAGCACAACTCCAAAACTGTACACATCGCTTCTTGCATTTAAATGACCTGATGACATATACTCAGGA
GCAGCATAGCCATATGTACCCATAATCCTTGTACTAACATAGCTTAGATCACCCGTTGGACCGTCCCTAGCT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002879808 botrytis-induced kinase1 [Arabidopsis lyrata subsp. lyrata] | 694 | 6e-071 |
| NP_181496 serine/threonine-protein kinase BIK1 [Arabidopsis thaliana] | 686 | 5e-070 |
| CAB75903 serine/threonine-specific protein kinase-like [Arabidopsis thaliana] | 575 | 4e-057 |
| AAO29965 serine/threonine-specific protein kinase -like [Arabidopsis thaliana] | 575 | 4e-057 |
| NP_191105 PBS1-like 1 kinase [Arabidopsis thaliana] | 575 | 4e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O48814 Serine/threonine-protein kinase BIK1 | 686 | 2e-071 |
| Q8H186 Probable receptor-like protein kinase At3g55450 | 575 | 2e-058 |
| P46573 Protein kinase APK1B, chloroplastic | 431 | 9e-042 |
| Q06548 Protein kinase APK1A, chloroplastic | 425 | 4e-041 |
| P43293 Probable serine/threonine-protein kinase NAK | 420 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6TBQ9 Putative uncharacterized protein | 490 | 2e-047 |
| A3RI54 Protein kinase | 479 | 4e-046 |
| B9HTI3 Predicted protein | 478 | 5e-046 |
| B9T7T7 Protein kinase APK1B, chloroplast, putative | 477 | 6e-046 |
| B9HPH0 Predicted protein | 474 | 1e-045 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G39660.1 BIK1 (BOTRYTIS-INDUCED KINASE1); kinase | 686 | 2e-072 |
| AT3G55450.1 protein kinase, putative | 575 | 2e-059 |
| AT2G28930.1 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 431 | 8e-043 |
| AT2G28930.2 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 431 | 8e-043 |
| AT2G28930.3 APK1B; ATP binding / kinase/ protein kinase/ protein serine/threonine kinase | 431 | 8e-043 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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