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Information for unigene UN41005

FASTA Sequence
Unigene ID: UN41005Length: 408 SSR 
GGATCACAACACAGCACACACAGCACACACACACACAAAATATTAAATCTCTCTTCATACATCAAAGAAGCAAATAATGGAGTCGA
TGAAGATGATGGTTGTTTTCATGGTCGTTGCAGTGGCTTTTTCAGCCGTAGGACAAGCGGCGGCTGCCACCGTGGAAGCTCCAGCT
CCAAGCCCAACCTCTGATGCTGCCATGTTCGTACCGGCATTGTTTGCATCTGTTGTTGCTTTGGCATCAGGTCTTCTCTTTTGAGT
CAAAACAAACATTTCGTTTTTCTCCATTTGTTTTATTGTTTCGTTCATGAGTTTGTGTGTGATCTGATTCTATTTTGTATAGAGCG
TTGTATTATTCTTAATGTAACCATCCGTTTCTATATTATATCATCATTCATCAGACTGTTTACG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABB97032 unknown [Brassica rapa]2665e-022
NP_564686 arabinogalactan protein 21 [Arabidopsis thaliana]2129e-016
XP_002894500 hypothetical protein ARALYDRAFT_892530 [Arabidopsis lyrata subsp. lyrata]2129e-016
NP_566458 arabinogalactan protein 12 [Arabidopsis thaliana]2065e-015
XP_002882829 hypothetical protein ARALYDRAFT_478739 [Arabidopsis lyrata subsp. lyrata]1975e-014

Swiss-Prot top hits (Blast detail)Scoree value
Q9C8A4 Arabinogalactan peptide 212123e-017
Q9LJD9 Arabinogalactan peptide 122062e-016
Q9STQ3 Arabinogalactan peptide 131675e-012
Q9LVC0 Arabinogalactan peptide 141532e-010

TrEMBL top hits (Blast detail)Scoree value
Q2V609 Putative uncharacterized protein2663e-022
A9PBQ1 Predicted protein1661e-010
B9IPQ7 Predicted protein1607e-010
A9P890 Predicted protein1436e-008
B9GY63 Predicted protein1436e-008

Arabidopsis top hits (Blast detail)Scoree value
AT1G55330.1 AGP212134e-018
AT3G13520.1 AGP12 (ARABINOGALACTAN PROTEIN 12)2072e-017
AT4G26320.1 AGP13 (arabinogalactan protein 13)1687e-013
AT5G56540.1 AGP14 (ARABINOGALACTAN PROTEIN 14)1543e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

Unigene MembersMember information