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Information for unigene UN41016

FASTA Sequence
Unigene ID: UN41016Length: 918 SSR 
GGAAGACTAGCCATTTTGTTATCTTGAAAACCTCTTAATCAGTCGGTGAATCCAAAGATTACCGATCGGAGACTCTCCTCTCATCT
ATCAGGTGGTTATCATCGTCGCTTAAAGTTCAGACCTTTTACCTCGCCGCAAGGAAAGATGCTGCTCGCTTGACGACGAACCTCCA
CCGATCTTTACCCTTTTTTCGCTCAACATCTATAGATATAGAGTGAAAGAGAAAGAATGTCGACACCAGCGAGGAAGAGGTTGATG
AGGGACTTCAAGAGGTTGCAGCAAGACCCACCTGCTGGAATCAGCGGTGCTCCTCAAGACAACAGCATCATGCTCTGGAATGCTGT
TATTTTCGGGCCTGATGATACCCCCTGGGATGGAGGTACTTTCAAACTCTCACTGCAGTTTTCAGAAGATTATCCAAACAAACCAC
CTACTGTTCGGTTTGTTTCACGGATGTTCCATCCTAACATATATGCTGATGGGAGTATATGCTTGGACATTCTCCAAAACCAGTGG
AGTCCTATATATGATGTCGCTGCTATACTTACCTCCATCCAGTCATTGCTCTGTGATCCTAATCCGAATTCTCCTGCCAACTCGGA
AGCTGCGCGAATGTTCAGCGAAAGCAAACGAGAGTACAACAGAAGAGTCCGCGAGGTTGTGGAACAAAGCTGGACTGCTGACTAAC
TAAATAGTCTTTTCTTTGTAGCATTTTTGTCTTCAAAAAAAAACAATTGAACCTTTTTTCTTGTGTTTGATTCCACCAACACCGTC
TCCCTCTCCCCTTTTTATGTTTATGTCTTTGTGTGTGTGTGTGTTTCAGACTCTGTGATTTGTTTGTTCCTTACAATGTTTCTATG
TGTTTACATGTAGTATTTTAACCAAATTCGTCTTCATAATTGTTATATGTATTTCACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565289 ubiquitin-conjugating enzyme E2 A [Arabidopsis thaliana]8103e-084
CBI32005 unnamed protein product [Vitis vinifera]8051e-083
NP_563951 ubiquitin-conjugating enzyme E2 1 [Arabidopsis thaliana]8041e-083
ABC01903 ubiquitin carrier-like protein [Solanum tuberosum]8032e-083
P35130 RecName: Full=Ubiquitin-conjugating enzyme E2 2; AltName: Full=Ubiquitin carrier protein 2; AltName: Full=Ubiquitin-conjugating enzyme E2-17 kDa 2; AltName: Full=Ubiquitin-protein ligase 28022e-083

Swiss-Prot top hits (Blast detail)Scoree value
P42745 Ubiquitin-conjugating enzyme E2 28101e-085
P25865 Ubiquitin-conjugating enzyme E2 18046e-085
P35130 Ubiquitin-conjugating enzyme E2 28021e-084
P25866 Ubiquitin-conjugating enzyme E2 27841e-082
P42746 Ubiquitin-conjugating enzyme E2 37061e-073

TrEMBL top hits (Blast detail)Scoree value
A0T2P5 Ubiquitin carrier protein8102e-084
Q2PYX5 Ubiquitin carrier protein8031e-083
B7FGK6 Ubiquitin carrier protein8021e-083
A9PD36 Ubiquitin carrier protein8012e-083
A9NMK1 Ubiquitin carrier protein8003e-083

Arabidopsis top hits (Blast detail)Scoree value
AT2G02760.1 ATUBC2 (UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase8118e-087
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8054e-086
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase8054e-086
AT5G62540.1 UBC3 (ubiquitin-conjugating enzyme 3); ubiquitin-protein ligase7061e-074
AT4G27960.1 UBC9 (UBIQUITIN CONJUGATING ENZYME 9); ubiquitin-protein ligase3583e-034

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
103  75%
 
111  25%

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