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Information for unigene UN41022

FASTA Sequence
Unigene ID: UN41022Length: 1024 SSR 
GGAAGTTGAATGAAATAAAGAAGTTAAAGTTTTATCTTGTTCTATCTCTTCTTCTCTGTCTTTAAGTTTTACCAACTAAGCCACAG
CTCATCACTAAAGCATTTTTCTCATCCATATAAGTCACATAACTTCCAACCTCACTTTCCCATCCACGCATAAACTCAAACTTCAA
AACACAATGGCAACCATTCGTCTAGCGCTAGCTCCTCTCCTCCTCCTCCTCCTCACCGCCATATTCCTCTCCACGGAGGTAACTGC
TCAGCCCGCCGCTCCTGCTCCTGGCCCTGCCGGTCCCATCAACATTACATCTATCCTAGAAAAAGGCGGTCAGTTTGTTACTTTCA
TCCGTCTTCTAAACACAACTCAAATCGGAAACCAAATCAACATCCAAATCAACAGTTCGTCAGAAGGCATGACCGTATTCGCACCA
ACGGACAACGCTTTCCAAAACCTTAAACCTGGAGCCCTAAACAAGTTAAGCCCGGACGACCAAGTCAAGCTCATTCTTTACCATGT
TAGTCCCAAGTTCTACACAATGGATGACCTTCTCTCCGTAAGCAACCCTGTCAGAACACAAGCTACTGGTCGAGACGGTGGAGCGG
TTTACGGACTTAACTTCACCGGTCAAGTGAACCAAGTGAACGTGTCGACAGGTGTTATCGAGACACGTGTCAGTAATGCATTAAGA
AAAGAACGTCCACTTGCGGTTTACGTGGTGAACATGGCATTGTTGCCTGAAGAGATGTTTGGAGACCGCAAGAAGATCTCATCGGT
GGCGCCTGCTCCAAAATCCAAATCTCCTGCTGTCTCTGATGACTCATCAGACGACTCCTCTAAGAAAGCGGCGGTTCCGTCCCAGA
AGTCTGGCTCCGGTGAGATGAAGGCTGGATTAGGCTTTGGTCTTGGATTTATTCTCTTATGTTTAAAATTCATTGTTTAATTGTGC
TGCTTTATTTTTTTTATTTAATTGTGTGGGTTGTGTAATAAGAAACTTGTGTATTGAATATATGATGCATCATGCTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002865383 hypothetical protein ARALYDRAFT_494579 [Arabidopsis lyrata subsp. lyrata]10236e-109
NP_199226 fasciclin-like arabinogalactan protein 13 [Arabidopsis thaliana]10211e-108
XP_002892185 hypothetical protein ARALYDRAFT_470362 [Arabidopsis lyrata subsp. lyrata]9564e-101
NP_563692 fasciclin-like arabinogalactan protein 9 [Arabidopsis thaliana]9502e-100
AAN60339 unknown [Arabidopsis thaliana]9465e-100

Swiss-Prot top hits (Blast detail)Scoree value
Q9FFH6 Fasciclin-like arabinogalactan protein 1310223e-110
Q9ZWA8 Fasciclin-like arabinogalactan protein 99632e-103
Q9SIL7 Fasciclin-like arabinogalactan protein 66318e-065
Q8LEJ6 Fasciclin-like arabinogalactan protein 114759e-047
Q8LEE9 Fasciclin-like arabinogalactan protein 124264e-041

TrEMBL top hits (Blast detail)Scoree value
B3LF88 At1g038709501e-100
A0T2P3 Putative uncharacterized protein9151e-096
B9IQS4 Fasciclin-like arabinogalactan protein 9.26524e-066
B9RVS1 Putative uncharacterized protein6462e-065
A5BN83 Putative uncharacterized protein6345e-064

Arabidopsis top hits (Blast detail)Scoree value
AT5G44130.1 FLA13 (FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 13 PRECURSOR)10232e-111
AT1G03870.1 FLA9 (FASCICLIN-LIKE ARABINOOGALACTAN 9)9632e-104
AT2G20520.1 FLA6 (FASCICLIN-LIKE ARABINOGALACTAN 6)6317e-066
AT5G03170.1 FLA114758e-048
AT5G60490.1 FLA124264e-042

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
74  100%

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