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Information for unigene UN41025

FASTA Sequence
Unigene ID: UN41025Length: 1140 SSR 
GGGGTTATTAAAAAATGAAAGCAATCATATGAAAAGACTCTTTAAAATCAAAGGTCGAGTGAACAAAAACACTACTCTCATTCTTC
AAACCTCGAACCCAAAACCGCTAACAAAAAACACCAACCTATGTTATGTTCCCCATTTGTCCTTCCCTTCAAGGCTTCACAGAGCT
CAAAACTTTTATTTTTGGTCAAACATCAAATCATCAATCTTCCATTTACCGCCTTCCGTTCCCACCTCTTCTTTGGTATCGGTGGT
TGATCATCCTGTAATTGCGAAATCCGCTTGTCCTGTTGGCTGTAGCAGAAAGCGGTTGCAGACGGCTGCTTATGCCAAATGCTCCT
AGCGATCCCAGATCCAAGTACCCATCATCCATAGAATCATCCGACTCAAGGTCATCATCATCATCATCGTCATAAGAATCAGATTC
ACCGTTGTAAGGCTCAATAACATAGTCTCCAAAAACCATAGCACCGGGTGTCGACGACATGAGCGTGCTAATTACATCGCTCCTCT
CCCTCTCAACTTCAAGCTTCTTCCACTTCTCCTCCATCACAGGATCAATGGCTCTTGGTTTAGCTCTCGGGTGAACCTCCTTAACA
TGTTTCTTGAGTTGCCTATAGCTCCCGGAAAACAAACAGTTGTCGTTCATGCAACCCCTTTTCCTCGAGTTCAGATACTTTCGAGC
ATCTTTCACCACAGTCCAACCTTTCACCTGACCCCGACAGAGCGGGCACAACAGCTCCGCAGGTTTACCGCTCTTCTCCTCCTTGG
CATAGGCTTTTTTGTACTGCTCTAGACAATTTGAGAACCGGTTTCCAGTGGCGCACATGTAAGGACGGCAACCTTTGTAGTAAGAT
GAGCAAAGGAGGAGAACCGAGTGATGAGGGATCTCAAGACAGACAGGGCATGTTACACCCTTCCAAGCTTTTCCTTTCAGTGACTT
CTTCTTCTTCTTATGTGGCTTTTCTTTGCTAATAGTCTTTTTAATATTCTTAAGAGGGTTTGGTCTTTCCCCAGATCGATAGCGGA
GACCATCTACATTAACTCTCCCCATCCAGACAATCGGGAACGACGGATTCCGGCGGAAGAAGGTTTGTTTGGTTTACTGGGATTGC
GGAGGAGACGCCCTAAGCGGCG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002874536 hypothetical protein ARALYDRAFT_489753 [Arabidopsis lyrata subsp. lyrata]9252e-097
NP_192586 uncharacterized protein [Arabidopsis thaliana]9011e-094
XP_002889159 hypothetical protein ARALYDRAFT_476943 [Arabidopsis lyrata subsp. lyrata]7281e-074
NP_974163 uncharacterized protein [Arabidopsis thaliana]7262e-074
NP_177900 uncharacterized protein [Arabidopsis thaliana]7217e-074

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9M0T4 AT4G08460 protein9017e-095
Q9CA17 Putative uncharacterized protein T32E8.107261e-074
Q84K51 At1g777707215e-074
Q9C9X8 Putative uncharacterized protein At1g681406086e-061
Q2V4E1 Putative uncharacterized protein At1g68140.26061e-060

Arabidopsis top hits (Blast detail)Scoree value
AT4G08460.1 protein binding / zinc ion binding9014e-097
AT4G08460.2 protein binding / zinc ion binding9014e-097
AT1G77770.2 protein binding / zinc ion binding7267e-077
AT1G77770.1 protein binding / zinc ion binding7213e-076
AT1G68140.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF1644 (InterPro:IPR012866); BEST Arabidopsis thaliana protein match is: protein binding / zinc ion binding (TAIR:AT4G08460.2); Has 145 Blast hits to 136 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 145; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).6084e-063

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  50%
 
201  25%
 
191  25%

Unigene MembersMember information