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Information for unigene UN41034
| FASTA Sequence |
| Unigene ID: UN41034 | Length: 905 |
SSR | | ATGTAACACGGCTTATTTCTTATTAATTGCATAATGTATTGTTGAATCTGCATATCCCCAAATCTACAAGACAAATGATACACAGG
AGTATAAACGAGCTACTTCAAAACTATTGAGAGTTTGATTCTTATGGGTGTAGATGTCGAATGGAATCTGGTGAATGACAACAACA
ACAACAACATAAACATCTCGGTGATCTGTCTTATGACCTTGTTGCTTCACATTACACAGCCACAGCTTCTGGCTTCTTGCTGGTCT
TGATTCCTTTTATAGCTTCTTCATAGTCTTTAGCTCCAAATACAGCTGATCCAGCTACTAGAGCATTTGCTCCAGCCTCAATAACC
TTGTATGCATTCTTTGGAGTGACACCACCATCAACTTCAATCCATGGGTTTACTCCCTTTTCGACACACATTCTTCTCAAATCGGA
GATTTTCTTAACTTGGCTTTCGATAAAGCTCTGTCCACCAAACCCGGGGTTGACCGACATTATCAAGACCAGATCCACCACCTCCA
ATACATATTCTATAGCACTCAATGGGGTTCCAGGGTTTAGAACAACTCCAGCTTTAGCACCTAAGCTTTTGATTTGATTGACAGTG
CGGTGCAAATGGATGGTGGATGACTGCTCACAGTGTACACTGACGATGTCTGCACCTGCTTTGATGAAATCTGGTACCCTCAGATC
TGGTTCCACTATCATAAGATGAACATCCAAAGGAAGATCAGTAACAGGACGCAAAGCATCAACACGAGCTGTGGCCTTCACAACAC
CATCATGACTTCTCCTTCTGGAGAAAGAAAAGGAAGTGGGTTGGTAAAGGAGCGACCTTTGAGGCCTAAGACCGAACCCATTGACC
TGGGTTGACGAACAACACAACGAAGTGGATACTGAGCTCGACATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002866432 hypothetical protein ARALYDRAFT_919384 [Arabidopsis lyrata subsp. lyrata] | 838 | 1e-087 |
| NP_200949 D-ribulose-5-phosphate-3-epimerase [Arabidopsis thaliana] | 829 | 2e-086 |
| BAH57278 AT5G61410 [Arabidopsis thaliana] | 829 | 2e-086 |
| Q43157 RecName: Full=Ribulose-phosphate 3-epimerase, chloroplastic; AltName: Full=Pentose-5-phosphate 3-epimerase; Short=PPE; AltName: Full=R5P3E; Short=RPE; Flags: Precursor | 827 | 3e-086 |
| AAC24709 ribulose-phosphate 3-epimerase transit form [Expression vector pFL505] | 827 | 3e-086 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q43157 Ribulose-phosphate 3-epimerase, chloroplastic | 827 | 1e-087 |
| Q43843 Ribulose-phosphate 3-epimerase, chloroplastic (Fragment) | 822 | 4e-087 |
| Q9ZTP5 Ribulose-phosphate 3-epimerase, chloroplastic | 803 | 7e-085 |
| P74061 Ribulose-phosphate 3-epimerase | 586 | 1e-059 |
| O34557 Ribulose-phosphate 3-epimerase | 487 | 3e-048 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z3J9 AT5G61410 protein | 829 | 1e-086 |
| Q9SAU2 Putative ribulose-5-phosphate-3-epimerase | 829 | 1e-086 |
| Q8S4X2 Ribulose-5-phosphate-3-epimerase | 826 | 2e-086 |
| A9NP17 Putative uncharacterized protein | 819 | 2e-085 |
| B9RLW1 Ribulose-5-phosphate-3-epimerase, putative | 817 | 3e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G61410.1 RPE; catalytic/ ribulose-phosphate 3-epimerase | 830 | 5e-089 |
| AT5G61410.2 RPE; catalytic/ ribulose-phosphate 3-epimerase | 830 | 5e-089 |
| AT3G01850.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 268 | 7e-024 |
| AT3G01850.2 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 268 | 7e-024 |
| AT1G63290.1 ribulose-phosphate 3-epimerase, cytosolic, putative / pentose-5-phosphate 3-epimerase, putative | 261 | 5e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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