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Information for unigene UN41039
| FASTA Sequence |
| Unigene ID: UN41039 | Length: 1236 |
SSR | | AATAGAAAGATTTGTACTTTCAGTGTTTGTTAGATCTGTTGAATAAATCGGAGTCAATGTCGGATCCACCTCGATTCCGATCGGTG
GTTATTGGTCCAACCGGAAACAAGCTGCAGAGGAAACCGCCGGGGATGATGAAGAAGACGACCGTTGAATCAAAAGATGAGAAGAA
AACGAAGAAACCACCAGATACTACTCCGGATTCGCCAACGACGACTCTGAAGCAATGCTCTTCGATTCTGAGACGGAACAGTGCTT
CCTCCATGACTGCTTCTTATTCCTCTGATGCCTCTTCTTCTTGCGACTCGTTGCCTCTGAGCGTGGCCTCTTCTTCTTCCACCTGT
AAGAAGAAGCCTGTGAGGCGAAGCGGGTCTGTCTCCTCCTCCCCCTCCGGTGCATCGATGAGAAGGAAGCAGGTTGATGAGAAAGA
AGACAAGGCTGCTGCTGCTGCTGCTGCTAGTAATGCTGATTGCTTCGCTGACGGTAGAAAAAGATGTGCTTGGATCACTCCTAAAG
CTGACACGTGTTATGTTGCTTTCCACGACGAAGAATGGGGAGTTCCTGTTCAGGACGACAAGAAGCTTTTTGAGTTGCTATGTCTC
TCCGGTGCTCTATCCGAGCTCTCTTGGACCGACATTCTCTCTAGAAGGCCATTACTCAGGGAAGTTTTCATGGACTTCGATCCGGT
TGCTGTTTCTGAACTCAACGAGAAGAAGGTAGCCGCCGCTGCCTTATCCTTGCTATCTGAGGTTAAGATACGTTCAATCCTCGATA
ACTCACGCTGTGTGCGCAAGATTATAGCTGAACATGGATCATTCAACAAGTACATGTACAACTTTGTGAACAGTAAGCCTACACAG
AGCCAGTTCAGGTATCAAAGACAAGTCCCTGTGAAGACATCAAAGGCTGAGTTTATAAGCAAGGATCTTGTACGCAGAGGGTTTCG
CAGCGTGAGTCCTACGGTTGTTTACTCCTTCATGCAAGCAGCTGGTCTTACAAACGACCATCTCATTGGCTGCTTCAGATACCAGG
AGTGTTGCTTAGATGCAGAGAAGAAGAAGAACGAGAGTGATAAATAAATTGTATGTTTTGAGGATATGTTGTTTTCTTTCAAAGAT
GATGATTTGACACAACGAAATTTTGCTACCGTACCGTGAAGTGTTCCTTTTGCCTTTTGGCGTTGTATAGATGTGTTTTCGTTATT
GGTTTATGCATAGTTAGTGGAGCGTTGCGAGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002892889 methyladenine glycosylase family protein [Arabidopsis lyrata subsp. lyrata] | 1266 | 5e-137 |
| NP_173049 DNA glycosylase-like protein [Arabidopsis thaliana] | 1261 | 2e-136 |
| NP_178200 methyladenine glycosylase-like protein [Arabidopsis thaliana] | 976 | 2e-103 |
| XP_002887808 hypothetical protein ARALYDRAFT_477160 [Arabidopsis lyrata subsp. lyrata] | 960 | 2e-101 |
| XP_002529378 DNA-3-methyladenine glycosylase, putative [Ricinus communis] | 760 | 3e-078 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P05100 DNA-3-methyladenine glycosylase 1 | 366 | 5e-034 |
| Q7VG78 Probable GMP synthase [glutamine-hydrolyzing] | 353 | 2e-032 |
| P44321 DNA-3-methyladenine glycosylase | 300 | 2e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9S9N7 At1g15970 | 1261 | 1e-136 |
| Q9SAH6 At1g80850 | 976 | 2e-103 |
| B9STQ9 DNA-3-methyladenine glycosylase, putative | 760 | 2e-078 |
| B9IMD8 Predicted protein | 759 | 2e-078 |
| B9HB20 Predicted protein | 745 | 9e-077 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G15970.1 methyladenine glycosylase family protein | 1262 | 6e-139 |
| AT1G80850.1 methyladenine glycosylase family protein | 998 | 2e-108 |
| AT5G57970.1 methyladenine glycosylase family protein | 708 | 1e-074 |
| AT5G57970.2 methyladenine glycosylase family protein | 708 | 1e-074 |
| AT1G75090.1 methyladenine glycosylase family protein | 605 | 9e-063 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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