Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN41050

FASTA Sequence
Unigene ID: UN41050Length: 873 SSR 
GCTTCTTTTGACTTTTAGGTTGTAGGAATTAATTGAAGTGATAGAGAGAGAGAGAGAGAGAAATTTGCACAGAGTTATATCATTAA
GAGGTTGTAACGAATTACCCACAATCTAGGAAACCCTGATTGAATTGAATTCATTCATCTTTCTTTTTTTTTAAAAAATCTTTTGC
ATTGTGGTTGATTTTTTCCCGGGAAAATTGGTGAATCATCAGTTTCCTGCGGTAGCTAAAAGTTTCTCTCTTTTTTTTTTATTGGT
GAGGGAGTCATGGGTTTCTTGTCTACATAGCTTCTAATAAAGTTTCAAAATCTTCTGTAGAAAAAATAAATCTGTCGACTTTTCAT
TTTTGTTTCCATTAAAGCTTTTCTTCTATACATCAATGGAGGAAGTGTCTCCGGCGGTTGCTATGCCTTTCATGCCATTCCCCGAG
ACCCAGATGGAGCTCGCAGGTATCATGTTGGGCAATGGCTACTGCAACGACCAATACTCAGCTCAAGATTCCGACAACAACGGCGA
GGAGACTTCGTGTTCCGTTTCTGGAGCTCAATCGTCAGAGATAGTCGCCGGAGAAGGGATCAACAACGGCTCAGACGAGAGATCGA
CGAAGATGATGATCAGCAGAACGGAGAGCAGGAGTCTGTTCGAGTTCAAGAGCGTGCCTTTGTACGGAGTGACTTCGATCTGTGGG
AGAAGACCGGAGATGGAAGATGCTGTCTCCACCATACCTAGATTCCTTCAATCTCCGACCAATTCGTTGATTGACGGTCGTTTCAA
TCCTCAGTCAACCGCTCACTTCTTCGGCGTCTACGACGGACACGGCGGTTCTCAGGTTGCGGACTATTGCAGAGAGAGGATGCATC
TGGCTTTAGCTGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34574 unnamed protein product [Thellungiella halophila]4885e-047
CAA55484 ABI1 [Arabidopsis thaliana]4473e-042
NP_194338 protein phosphatase 2C 56 [Arabidopsis thaliana]4464e-042
AAK59578 putative protein phosphatase ABI1 [Arabidopsis thaliana]4464e-042
XP_002867581 hypothetical protein ARALYDRAFT_492207 [Arabidopsis lyrata subsp. lyrata]4411e-041

Swiss-Prot top hits (Blast detail)Scoree value
P49597 Protein phosphatase 2C 564462e-043
O04719 Protein phosphatase 2C 774032e-038
Q0JLP9 Probable protein phosphatase 2C 62491e-020
Q9LNP9 Protein phosphatase 2C 72444e-020
Q9CAJ0 Protein phosphatase 2C 162203e-017

TrEMBL top hits (Blast detail)Scoree value
Q9SE91 ABI1 protein (Fragment)4302e-040
B9HDB4 Predicted protein2796e-023
A4Q9A0 Abscisic insensitive 1B2715e-022
A4Q9A1 Abscisic insensitive 1B2715e-022
A4Q9A2 Abscisic insensitive 1B2715e-022

Arabidopsis top hits (Blast detail)Scoree value
AT4G26080.1 ABI1 (ABA INSENSITIVE 1); calcium ion binding / protein serine/threonine phosphatase4462e-044
AT5G57050.1 ABI2 (ABA INSENSITIVE 2); protein serine/threonine phosphatase4031e-039
AT5G57050.2 ABI2 (ABA INSENSITIVE 2); protein serine/threonine phosphatase3942e-038
AT1G17550.1 HAB2; catalytic/ protein serine/threonine phosphatase2444e-021
AT1G72770.1 HAB1 (HOMOLOGY TO ABI1); catalytic/ protein serine/threonine phosphatase2202e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
213  75%
 
181  25%

Unigene MembersMember information