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Information for unigene UN41058

FASTA Sequence
Unigene ID: UN41058Length: 1112 SSR 
GTCTTCTCCAATTCCATAACAACATCAACAGAGTCGGAAGCATTTGTTGCAGAGCTCGAACGCTGGCTCTCAACTACTTCACTACC
ATCAAGTCTTGAATCCAGTTCACGAGAAACCAACTCTACAATTCTCTCCGAAATTTCATCTGAGGAAGATCTCTTCAGCACAGAAG
ACTCATTAGGAGAGCCAGACGACTCAGTAATTAAAGACAGTTGAGCATCAGAGGGCTCTATCCTGTTAAGATTATCTGTATCAGGT
GAGACTTCAACATTCACAGACGATGTTCTCTTCTCCAGATTTTCAATCTGGCTATCCTCTTCATTTTTAGTCTCATCCGTATCAGC
AATCTCACGCGGTCCATCGAAAACAGCATCACTGTTTCCCACAGAAGCTTCATTTGTTCCAGCATCCTCCTCAGGCATAGCCTCCT
CTGCCTCTGATCCACCCTCTTCGGACTTGGGCGCCTCTGGCTGTGACTCTCGCGATTCCTGCTTCTCATCAGGTTCTAAACTACTC
GTGTCACCAGGATGTTGAACCGAGTATCCTGAAGAATCTTCAAGAGCCATCTGAGATTCAGGTTCACCATCTTTGGGATCTAAAAC
AACAGTCTCTGCCACCTCAGCTTCTGTTGTCACATTTGTTTCTTTATTTGCTTCAACGGATCCTCCTTCTTTTTCAGTGTCCACCT
CACCAGATCCTCCTCCTTCTTTTTCTTCTTCTTCTTCTTCGGTTTGAGGTGGATTTTCTGAACTAGCAGAGTCTTCCAATGTATCA
AGTTTCTCATCAGAGTTGTTACCCATGAAGGACATTGCAGGATCAAATAGACTTTTGGTATCAACTGCAGGTGGCCACATACTTGA
AGCTTCACCGGCAGATGATTCGGACTTGTCATCAAAGCCAAGGGCGTTGTCGAAATTCTTCTCGATGTTCTTAACGCTCTCCTGGA
ATTTATTGACTGCCCCAGTGAGATCTGGGAATCCTCCCTGCGATACTTTCCCACTGAACCAAGCCATCACCACAATATCTGAAAAC
TTTGTTTAATCTCGCAAATCACCACCGGATCAGATCCATCTCCATCCCTTGTGCTGATATTGGGATCAGAAAGAGCTTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
AAG52248 unknown protein; 70672-76070 [Arabidopsis thaliana]10211e-108
NP_178101 golgin candidate 5 [Arabidopsis thaliana]10211e-108
NP_001185441 golgin candidate 5 [Arabidopsis thaliana]10211e-108
XP_002267350 PREDICTED: hypothetical protein [Vitis vinifera]3175e-027
XP_002303293 predicted protein [Populus trichocarpa]2423e-018

Swiss-Prot top hits (Blast detail)Scoree value
Q0WVL7 Golgin candidate 510215e-110
Q75JC9 Uncharacterized protein DDB_G02716702034e-015

TrEMBL top hits (Blast detail)Scoree value
B8AWQ0 Putative uncharacterized protein2905e-024
B9FLK8 Putative uncharacterized protein2905e-024
Q6AT30 Os05g0559900 protein2905e-024
Q2HU52 TRNA-binding arm; t-snare2815e-023
B9GXB9 Predicted protein2422e-018

Arabidopsis top hits (Blast detail)Scoree value
AT1G79830.1 GC5 (golgin candidate 5); protein binding10215e-111
AT1G79830.2 GC5 (golgin candidate 5); protein binding10215e-111
AT5G55660.1 LOCATED IN: mitochondrion; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: DEK, C-terminal (InterPro:IPR014876); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G26630.2); Has 348612 Blast hits to 121147 proteins in 2910 species: Archae - 1231; Bacteria - 38190; Metazoa - 148268; Fungi - 42547; Plants - 15024; Viruses - 2447; Other Eukaryotes - 100905 (source: NCBI BLink).1139e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
94  100%

Unigene MembersMember information