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Information for unigene UN41130
| FASTA Sequence |
| Unigene ID: UN41130 | Length: 1300 |
SSR | | ATACATCAACCAAATGGTAGAAATTAGAAGACATGCAAAATCATTTCCTTTCTTTAACAATAGAAAGCTTCCATACCGATTAAGAC
AATGGTATCTTAAACTTAAACTCAATACATAGAACTATAACAATCGTACATAATGAAGATGCAAAGTAGCAGTCCAATCTCTCTGT
ATAACAAAAGGCAACAAAAGGCTCCAAAAGCTTGTGTTCCTTTGTTGGTAAATGATCGAAGAATGGTTAAGATCCTTACACATTCT
TAATGAACAAGCGGGTCTTGAGTGAAAAAGAACTCAAATGATTTGCCGGAATTTTCAAATTCCAGCATGCTCAATGCAACTTCACA
GCTTTGCGAAACAATCGGCTCAGGGTCTCTTGAGAATTCCTGTAGCAATGCGATGCTCTGCTCATCTGCAATAGAACCAAGCGCTT
CTGCAGCCTCGTGTCTAACCATTGGGTGCTCATTCAAATCTCTCAGTATTTTGCTTAGTGTATCTAAAGCAGCTTTGTTTTGCAAT
TGCCCCAACACATAAGCAACCTCATGACGTAGAAGGGCACTATCAGCACTCAAAGAATCAACAATAGCAGAAACAGCCTCCTCTCC
ACCATGATTCCTTAGAGCGAAAAGAGCAGCATATCTCTCATACATGCCTTTTGTTTCATCCATAAGAATCTCCCTCAGTTGGTGGA
CAGAGGAGAAAGCAGCAGCCGGAGCCGCTGGGTCAACAGACATGAAAGGTGATCTCTCTGTCGAGTCTGACTAGTTCTTCTCCGCA
TCAACACTACTCAACTCTTCGATCCTTTTGAGAGCTAACTCACATGTCTCCCGAACCTCCTGAGCAGGATCCAAGATCAAGCTTTT
CTTCAATATCTCAGCATTACCAGCTAAACCAATGGCTCCAAGAGCTTCTGCTGCCTCATGGCGTACAATAGGATGCAAGGACATGT
CGTTAAGAACGGACTCAAGAGCAGGAACAGCTTCAGCATCTTGCATCTGTCCCAACGCAAACGCAGCTTCATGTGCCAACAAGTTG
GATGAGTCTCTGGATGCGAGGATAAGAGCGTTGCGAGGAGCAGGGCCTTTCAAGTTGCGAAGAGAGAAGAGAGCTCTAAACCGCTC
TGAGATCGGCTGCGACTGATCCAACAATCGCTCGCACAGAAACTTCTCCAATTTACTTACGCCGCCGTCTTCCGTCGGTGAAGCTG
AAGCCATCACAAGTTTGATCGGTCGTTAGCTGAAGAACCTGGGTTTCCGACACGAGGACGGCGGAGTAACAGAGCCGACGACGACG
ACGACTAGGG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002876460 hypothetical protein ARALYDRAFT_907292 [Arabidopsis lyrata subsp. lyrata] | 1373 | 2e-149 |
| NP_567062 deoxyhypusine hydroxylase [Arabidopsis thaliana] | 1371 | 4e-149 |
| CAB68156 putative protein [Arabidopsis thaliana] | 1277 | 3e-138 |
| XP_002302059 predicted protein [Populus trichocarpa] | 1182 | 3e-127 |
| XP_002263238 PREDICTED: hypothetical protein [Vitis vinifera] | 1178 | 9e-127 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94JW0 Deoxyhypusine hydroxylase | 1371 | 2e-150 |
| Q2QXB3 Deoxyhypusine hydroxylase-A | 1071 | 1e-115 |
| Q2QLW3 Deoxyhypusine hydroxylase-B | 1062 | 1e-114 |
| Q5ZIP3 Deoxyhypusine hydroxylase | 664 | 2e-068 |
| Q5PPJ4 Deoxyhypusine hydroxylase | 662 | 3e-068 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DGP9 AT3G58180 protein | 1371 | 3e-149 |
| B9GS37 Predicted protein | 1182 | 2e-127 |
| B9H8J8 Predicted protein | 1171 | 4e-126 |
| B9S4W3 Lyase, putative | 1171 | 4e-126 |
| C6TNQ0 Putative uncharacterized protein | 1138 | 3e-122 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G58180.1 PBS lyase HEAT-like repeat-containing protein | 1372 | 1e-151 |
| AT3G62530.1 PBS lyase HEAT-like repeat-containing protein | 398 | 1e-038 |
| AT3G43260.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: PBS lyase HEAT-like repeat-containing protein (TAIR:AT3G62530.1); Has 43 Blast hits to 39 proteins in 10 species: Archae - 0; Bacteria - 0; Metazoa - 8; Fungi - 0; Plants - 32; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). | 142 | 5e-009 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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