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Information for unigene UN41147

FASTA Sequence
Unigene ID: UN41147Length: 1357 SSR 
GGATTGCGGTCTTATCCCAAAATCCCAACCAAACACAGAGAAATTTTCTTGGTGGTCTTCTCCAATGGCGTTCTCAGCGACTCTGT
CTCAGCTTTCTTCTCTTTCGACAATCTCCTCTTCACTGCCACTTTCTTCTAGAGGCTTCCCTCTTCGAGCTCAGACTCAGTTCAGA
GTCAAAGCAGAGGCAGAGAATGAGAAACAGAGCACACAGACTAAATCCGAAGCGGAAGCTTCACCAGCTTCAACCAAAACCCCTAA
AACTCTTCCCAAGAAACCGGTTTACTCGAGTCGGTTTCCTCGTTTATGTTTCATATGTTGAATCCAATAAACAAGAATTTGATATT
TCTTTTTTGAGTTTTTTGAACAGTGAAGAAGGGTCAAATCGTTCGTGTAGACAAGGAGAAGTACCTCAACAGCATCAATTACTTGT
CAGTTGGTCATCCTCCTTTCTACAAAGGACTAGATTACATCTATGAAGATCGCGGCGAGGTCCTTGACATTCGTGTCTTTGAGACA
GGAGAGTATGCCCTTGTTGGATGGGTCGGTATCCCAACCGCACCGGCTTGGCTACCAACAGATATGCTCATCAAGTCCGAGAAACT
TGTTTACGAGCGACTATAGAGTCCACAAGTCTCCAAGAAGAATGCAACTGATACGATGGGTTGTGAGATGAATGATAACACAATGG
AACCACCATGATCATGTCAAGAGTTATACAATGTATCAAATGAGTTACCGCAGTCAAAAAAACTGTTGTGGAATGGAAAAAAAATG
TGATGAGACTGAATCTTACAAAAAGAATGCAGCTTCCATAGTTGCATACCTAAACCAATCTACACTCCTTTATTGCTGAGATGACA
ATCTAAACAAAACTGTCGTTCCTGATGAGAAACTATTATACTAAAGTAAAAAGGCTTATCCACGTTCCATGAAAACTCTCGATCTT
CTTTCTCTCTTAAGCTATGTCAAGTCCTTTAAACGAAGGAGACAAACGAACTGTGCCACGGCCACGTTGCTGGAAACTAACTTCAC
CGCTGTTACTACTCGTCTGCTCATACTTGTTCCTGCAAGCTGGGCAACGTCCATCGTTTTCGTTGATCTGCTTATGGCAGAAGAAA
CATAGCCGAAAGCCGCAAGGACATGGTAAGAAGCTTAAATCCGTTGCATCCATCTCTTCAGAGCAAATAGGACATTCACTTATCTC
GTCACCACCACCACCACCACTTCTTTCTTCTGATCAGACTTCTTCTTCTTATTCTTTCTACCGACATTACGATGAATCATCGCCTT
CTCTGGTAAAGCTTCTTGCTTGCACTTGTCTTTACTGTTCTTTCTACTGTCGACTCTGTGATGATGA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002888997 hypothetical protein ARALYDRAFT_476624 [Arabidopsis lyrata subsp. lyrata]4395e-041
NP_565093 NAD(P)H:plastoquinone dehydrogenase complex subunit O [Arabidopsis thaliana]4305e-040
XP_002310516 predicted protein [Populus trichocarpa]4224e-039
ACU15810 unknown [Glycine max]4208e-039
XP_002280638 PREDICTED: hypothetical protein [Vitis vinifera]4181e-038

Swiss-Prot top hits (Blast detail)Scoree value
P34909 General negative regulator of transcription subunit 41864e-013

TrEMBL top hits (Blast detail)Scoree value
Q9S829 At1g74880/F9E10_274304e-040
A9PJG3 Putative uncharacterized protein4223e-039
B9HER6 Predicted protein4223e-039
C6T2F5 Putative uncharacterized protein4205e-039
B7FML2 Putative uncharacterized protein4081e-037

Arabidopsis top hits (Blast detail)Scoree value
AT1G74880.1 NDH-O (NAD(P)H:plastoquinone dehydrogenase complex subunit O)4312e-042
AT1G74870.1 protein binding / zinc ion binding3371e-031
AT5G62910.1 protein binding / zinc ion binding2242e-018
AT3G48070.1 protein binding / zinc ion binding2223e-018
AT3G48070.2 protein binding / zinc ion binding2223e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
124  100%

Unigene MembersMember information