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Information for unigene UN41198
| FASTA Sequence |
| Unigene ID: UN41198 | Length: 486 |
SSR | | ACCACAAACCGGAAAATCCGGTTTTCTGAAAATAGAGTTTTAAACTCGAATAATACATACAATGTATATAATCCAGTTTTGTTGGT
GAAAGCGAACACATACATAGGCGTAGAACACGAGGAACTAACTACAATGTGATGACAATAATGCGATTTAACAACTTCAGACTCCA
AAGAGGTGAAGGAAGCTCTCTTGGTTTCGGAATTCTTTAACCCGACTTGAAGAGAAGAACAGCTTTTTGGTCGAGGTAAAAGTAAA
CGAAATGGTTTGTCTCGTGAGTTACGTAAGAACCAAAGTTGCGACCAACAATGCAATGCCAAGTCGCACCATGTTTCTTGTCAAAC
TCCTTTTTTATATTCTCAGCTATATCCTTCTCCACACTGTTATTCTCAAATGCGGCGACAGCGATATCGATAGCCTCCTTCTGCAT
ATCCTCTTTCATATCAGCACGGCGATGATGAGTGTGTGTGTGTGTGTGTGTGATCC
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| GenBank top hits (Blast detail) | Score | e value |
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| XP_002328627 predicted protein [Populus trichocarpa] | 396 | 4e-037 |
| NP_193328 dynein light chain LC8-type [Arabidopsis thaliana] | 395 | 5e-037 |
| CAB46031 dynein light chain like protein [Arabidopsis thaliana] | 395 | 5e-037 |
| AAL57365 neuronal nitric oxide synthase protein inhibitor [Arabidopsis thaliana] | 395 | 5e-037 |
| XP_002870199 At4g15930 [Arabidopsis lyrata subsp. lyrata] | 395 | 5e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3MHR3 Dynein light chain 2, cytoplasmic | 317 | 5e-029 |
| Q96FJ2 Dynein light chain 2, cytoplasmic | 317 | 5e-029 |
| Q9D0M5 Dynein light chain 2, cytoplasmic | 317 | 5e-029 |
| Q78P75 Dynein light chain 2, cytoplasmic | 317 | 5e-029 |
| O02414 Dynein light chain LC6, flagellar outer arm | 316 | 6e-029 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| A9P9B8 Predicted protein | 396 | 2e-037 |
| O23442 Dynein light chain like protein | 395 | 3e-037 |
| Q84VW0 At4g15930 | 395 | 3e-037 |
| Q8W1X1 Neuronal nitric oxide synthase protein inhibitor | 395 | 3e-037 |
| A5BC89 Putative uncharacterized protein | 385 | 5e-036 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G15930.1 microtubule motor | 396 | 4e-039 |
| AT5G20110.1 dynein light chain, putative | 187 | 6e-015 |
| AT1G23220.1 dynein light chain type 1 family protein | 179 | 5e-014 |
| AT4G27360.1 dynein light chain, putative | 174 | 2e-013 |
| AT1G52240.2 ROPGEF11 (RHO GUANYL-NUCLEOTIDE EXCHANGE FACTOR 11); Rho guanyl-nucleotide exchange factor | 164 | 3e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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