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Information for unigene UN41253
| FASTA Sequence |
| Unigene ID: UN41253 | Length: 1300 |
SSR | | GTAGCCATGTCGCTCACGATCCCGACGAACCTCGTCCTCAACCCGAGAGCCAACAAATCTCTCACTCAATCATTGCCTAAGTCCAC
CGCGAGGTTCGTCTGCTCCGATGACAAATCCGCGACGCAGCAACAGCAGTCCATGAAGGCTTTCTCCGCTGCAGTGGCTCTCTCTT
CCATCCTCCTCTCAGCTCCGATGCCAGCCGTCGCTGATATCTCGGGGTTGACCCCTTGCAAGGAGTCGAAACAGTTCGCCAAGAGG
GAGAAGCAACAGATCAAGAAGCTTCAATCATCTCTTAAGCTCTACGCTCCTGAAAGTGCTCCTGCTCTTGCTCTTAACGCTCAGAT
CGAGAAGACCAAACGCAGGTTCGTCTTCTTTACCAAACATGCACTTGAACTGTTTAGATCTCAGGATGATGATGATGATGATTCTG
CTCCATTTCATCTGCAATTGAATCTTTGATTTTGGAGTAACATATTAGATTCATGATTCAAGGCTAGCTCAACAATTATATAGGTT
ATATAGGACAAAAATAATAATTTGAAACTTTGAAATGTATATGTTTAAAAAACTTGGAAAGGTATATTTTGTTAAAAAAATTATTA
AGAATAATATTTTTATAATTAAAAAAAAAACAAATTCCATATAAACTATTGATATATACGTGGTTAAAAAAAAAAAAACTATTGAT
ATATACATAAGATTCGTTATTAGGATAGGGAGGACATGGGTTAGAGAGGTAGCACCTATTATCCTCCTAGTCCTAGAGTAGGCAAA
TGCCATGATACGGATGTGGTAATGAGATTAAAATTTCAAATGTTTGTTAGGTTCGACAACTACGGCAAGTATGGACTTCTGTGTGG
TGCAGACGGTCTACCACACCTGATAGTGAACGGAGACCAGCGGCATTGGGGAGAGTTCATAACTCCAGGCCTTCTCTTCCTCTACA
TTGCTGGATGGATCGGGTGGGTTGGGAGAAGCTACTTGATAGCGATCAGTGATGAGAAGAAACCAGCGATGAAAGAGATCATTATT
GATGTTCCTTTGGCTAGTCGTCTCATCTTCCGTGGTTTCATTTGGCCTGTTGCTGCTTACAGAGCGTTACTCAACGGCGATCTCAT
TGCCAAAGATGTCTAGAAAAACAAAAAACAAATCTATATTTGTTGTTTTGTTTGCTTCTCTTTCTCTCATGTTTTCCATTGTATGT
ATTGATATCTCTAATTAACTCTTCCTTCAAAGAATATCTTTGCATTATGGAAAAACTTGTATTTTGGATTAAATGTTAATTGCGGA
AAAACTCATT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAB52747 photosystem I subunit III precursor [Arabidopsis thaliana] | 549 | 8e-054 |
| NP_174418 photosystem I reaction center subunit III [Arabidopsis thaliana] | 544 | 3e-053 |
| AAK96474 At1g31330/T19E23_1 [Arabidopsis thaliana] | 539 | 1e-052 |
| XP_002891153 At1g31330/T19E23_1 [Arabidopsis lyrata subsp. lyrata] | 531 | 1e-051 |
| AAD27880 photosystem I reaction center subunit III [Vigna radiata] | 507 | 6e-049 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9SHE8 Photosystem I reaction center subunit III, chloroplastic | 544 | 1e-054 |
| P12355 Photosystem I reaction center subunit III, chloroplastic | 487 | 5e-048 |
| P13192 Photosystem I reaction center subunit III, chloroplastic | 479 | 4e-047 |
| P46486 Photosystem I reaction center subunit III, chloroplastic | 475 | 1e-046 |
| Q6B948 Photosystem I reaction center subunit III | 334 | 3e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9XQB4 Photosystem I reaction center subunit III | 507 | 4e-049 |
| A9PI20 Putative uncharacterized protein | 503 | 1e-048 |
| B7FF89 Putative uncharacterized protein (Fragment) | 502 | 2e-048 |
| Q9TI78 Photosystem I subunit III (Fragment) | 493 | 2e-047 |
| A5B2H3 Putative uncharacterized protein | 491 | 3e-047 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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