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Information for unigene UN41262
| FASTA Sequence |
| Unigene ID: UN41262 | Length: 1391 |
SSR | | GTCTCTCTCCTTTACCCACCACACACCTAACCCCAAATGCCTCACGCTCTTTAAACACATCTCTCTCTCTCTCTCTCTTTCCATCA
TCTGCAGATTATTCTCTGTCTCTTCCTCTGTTTTCTCCGCCTCCTCTGTTTTTTTTTTTCTGTTTTTCTTCTCATCAATGGAGGCG
TCATTGTCGATGATGAAATCATCCGTCTCTTCCCCCGCGACTGTGTTCCTCAGCCACCACCATAGACGCACCTCACGACCTATATC
TCCCACGTTACACAAAGCTTCCTTCTCTGTTCGCTGTTCTCTCCCTCCCTCGAAGCCTCCACGCCGCTCCGGAGCCAGCTCTGTTC
ACGCCGTTATGACTCTCGCTGGATCGTTGATAGGGAAGAAACGAGTGGATGAGAGCGAGAGTTTGACTCTGGAAGGTATCCGAAAC
TCTTTGATCAGACAAGAGGACAGCATTATATTTGGTCTGCTGGAGAGAGCCAAGTACTGTTACAATGCAGATACTTATGATCCTAC
TGCCTTCGACATGGATGGTTTCAACGGCTCTTTGGTTGAGTACATGCTCCAAGGCACCGAGAAGCTTCACGCTAAGGTTGGTAGGT
TCAAGAGCCCTGATGAACATCCTTTCTTCCCTCAAGATTTACCTGAGCCTATGTTGCCTCCTCTGCAGTACCCAAAGGTTTTGCAT
TTTGCTGCTGATTCGATCAACATAAACAACAAGATATGGAACATGTACTTCAGAGACCTTGTCCCAAGACTAGTGAAGAAAGGTGA
TGATGGTAATTACGGATCAACAGCTGTATGTGACGCTATCTGCCTTCAGTCTCTTTCAAAGAGGATCCATTACGGTAAATTTGTTG
CAGAGGCCAAGTTCCAAGCCTCACCCGAGGCATACGAGCCTGCCATCAGAGCACAAGATAAGGATGCATTGATGGATATGCTGACA
TTCCCGGCGGTGGAGGAGGCGGTGTAGAAGAGAGTTGAGATGAAAACACGAACATACGGGCAAGAAGTGAAAGTGGGCGTTAAGGA
GAAAGAAGAAGAAGAAGAGGTGAATAATGAATCTCAAGTTTACAAGATCAGTCCGATCTTGGTTGGCCACTTGTATGGAGACTGGA
TCATGCCCTTGACAAAAGAGGTTCAAGTGGAGTACTTGCTCAGACGACTAGACTGAACGAAAGATAAATGGCTTTGGTAGTAAACT
CTAATATAGTTTTCTTTATTTGGAATGTTTTTTGGTTTTTTTTTAACTTCACAAATCCCTCAACGTTAACTCACACTACACTATAG
TTCCATGTTTTGGTTTTCGAGGTTACTTGCAAAAGAAAACTGTGTGGTTTATGTACATTCTATCAATTGCGAAATCAAAGGGATGA
CAATGTTGTGTATGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566846 chorismate mutase 1 [Arabidopsis thaliana] | 1465 | 5e-160 |
| BAB01816 chorismate mutase precursor [Arabidopsis thaliana] | 1447 | 6e-158 |
| CAA81286 chorismate mutase precursor [Arabidopsis thaliana] | 1442 | 2e-157 |
| CAB54518 chorismate mutase [Arabidopsis thaliana] | 1440 | 4e-157 |
| XP_002877163 hypothetical protein ARALYDRAFT_484689 [Arabidopsis lyrata subsp. lyrata] | 1422 | 5e-155 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P42738 Chorismate mutase, chloroplastic | 1447 | 3e-159 |
| O13739 Probable chorismate mutase | 439 | 2e-042 |
| P32178 Chorismate mutase | 411 | 4e-039 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q29Q24 At3g29200 | 1465 | 4e-160 |
| Q30CZ6 Putative chorismate mutase | 1055 | 1e-112 |
| D2CSU4 Chorismate mutase 1 | 1005 | 8e-107 |
| B9T3T6 Chorismate mutase, chloroplast, putative | 994 | 1e-105 |
| B9IK27 Chorismate mutase | 977 | 1e-103 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G29200.1 CM1 (CHORISMATE MUTASE 1); L-ascorbate peroxidase/ chorismate mutase | 1466 | 2e-162 |
| AT1G69370.1 CM3 (chorismate mutase 3); chorismate mutase | 917 | 7e-099 |
| AT5G10870.1 ATCM2 (chorismate mutase 2); chorismate mutase | 692 | 8e-073 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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