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Information for unigene UN41285
| FASTA Sequence |
| Unigene ID: UN41285 | Length: 927 |
SSR | | GCTTGGTTAAATAAAAATTTGTTGGTTAAACCAAATAAACCAGTATTATTAAAACTGAACCAATTACAAACGAAAACCTGAAACCC
AAGTACACCAGATCAGCACATAAAAGGCAAAAAGATCTGCATACAAAGATAGATTGATTATAAGTATTCAAAGCAAAGAGTTTTAT
CACAAAGTTTCGCAGTATCGAAGAACAGTATAGCCGACCAGAGAAATATCCTTTCTAATGGGACTGACAGGCAAATCACTCCAGCT
TAACTCCGTAGACTCATATCTAATGGGGGCTGAGAAAGTATCTTCTGTTTTGGATCTTGTTCTGACTTAGCGGAAAAGACGTGGAA
CTGATCTTTTAGGTACTTTGCCTTCGAGCTTAAGTCTCCTATAAGACTCTCTGATATGGCAAGGTCTGATAGGACCTGAGTCGTTC
CTTTCCCCCATTACAACTCTAGCTGTTTCCACTAGTTCACCAACAAACATCTTTGCGATACCACAGTTCACAATTATAACTGGCAT
ACTGATCTTCTGACTCCCTGTCACTCCCTTCCTCATGTTTCCTTTTTGAAATGCAGATCTCCTAAAAGATTCATATCTGCTCATTT
GATCCTCAGTGAACTGCGACAAAATGACCTGCATCTTGGCCATCTTAGCTGGATCAGCAGTAGTTGGGTACTTGGTTAGCTCAGCT
TCCATGTTCTCTTCCTCTTCTTCTTCATCTTCATCTTTGTTCTTCCCTTCAGCAGCAACAACGACGGAGGAGGTTTTAGATTTCTT
GTTCTGATGGCGAACACCACCCACGTCTTGCTCCTCCTCCTCCTCTATCGCTGCTTCAAACGGATCCTTCGAATGCTTCATTTTTT
CCTGAAACCCTTTGATACTCGGATCCGATTTTTCAAGAGGCGCAGCGCAACTGGAAAGCTCCAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_193761 transcription initiation factor TFIID subunit D9 [Arabidopsis thaliana] | 641 | 1e-064 |
| XP_002869942 predicted protein [Arabidopsis lyrata subsp. lyrata] | 641 | 1e-064 |
| XP_002299376 predicted protein [Populus trichocarpa] | 552 | 2e-054 |
| XP_002277017 PREDICTED: hypothetical protein [Vitis vinifera] | 550 | 4e-054 |
| XP_002532706 Transcription initiation factor TFIID subunit, putative [Ricinus communis] | 545 | 1e-053 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q54XM9 Transcription initiation factor TFIID subunit 11 | 266 | 1e-022 |
| Q99JX1 Transcription initiation factor TFIID subunit 11 | 240 | 1e-019 |
| Q5U1X0 Transcription initiation factor TFIID subunit 11 | 239 | 2e-019 |
| Q5RA91 Transcription initiation factor TFIID subunit 11 | 237 | 3e-019 |
| Q15544 Transcription initiation factor TFIID subunit 11 | 234 | 7e-019 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9M565 Putative TATA binding protein associated factor 24kDa subunit | 641 | 7e-065 |
| B9GMZ1 Predicted protein | 552 | 1e-054 |
| B9T387 Transcription initiation factor TFIID subunit, putative | 545 | 1e-053 |
| B9GYR7 Predicted protein | 510 | 1e-049 |
| C5XGR0 Putative uncharacterized protein Sb03g031220 | 509 | 1e-049 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT4G20280.1 TAF11 (TBP-ASSOCIATED FACTOR 11); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor | 642 | 3e-067 |
| AT1G20000.1 TAF11b (TBP-ASSOCIATED FACTOR 11b); DNA binding / RNA polymerase II transcription factor/ transcription initiation factor | 490 | 1e-049 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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