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Information for unigene UN41298

FASTA Sequence
Unigene ID: UN41298Length: 1286 SSR 
GATCCTGCCGCTTGATTTTTATCACAATATAAACTAAATCTTTCATATTACTCTAGCATAGTAATCAACAAAACAAACCATCGTAT
CATATGGTCCTGATTCCTGATCCTTTACCTGTCGTTTGTATATTGAGATATTGGTCTACGTGGTACTAGTCACAGACTGATTAAAG
CTCTCTAATGCTCAAGTTATATGAAAGGTGATTGGTCAAAGAGCATAATTGAACACAAACTAAAGAATAAAAACATCGAAGCGTCT
GTAGTCCAACGGTTAGGATTATTGCCTTCCAAGCAATAGACCCGGGTTCGAAAAAATGAAAAATCAACCCCGTTGGTTCAGAACAT
CGGCGGTGAAGGATCAACAAAGCTGAAAATGCTGTCCAAATAGTTCTTGTTGTCCTCCTCGTAGTAGTTGCTGCAGTCACCACCAC
TTCTCTCTTTCACCGTTTCGTGTTTCTCGTCGGGTAAGCTCCGGCCTAGTGAATCTCCGGCGAGCATGAACCCTTCGTCAACTCCT
CCCGCCATCTCCGTGGTTTCAAACTCGTGAACCGACCAATCGTTTTCAGGAGGTTCTTTGATCGAGTTTAGACACGTGGATGATCC
AACGAACCCTGTCTTCGCCGCCAACGGTTCCTTCATCTCCGAGAACGACACTGTAGATGTCGGAGACTCAAGCTGCTGTTGCTGGT
CTTGGCTTGTTTTACTTGTCCAAGTGGTTAACAATGTCTTATGGGTGAAACCATGATGATGATGATGTGATGATGGTTTGGTTTGG
TAATGAAGAAGCTTTGATTCTCTAGCTAACCTTGCTTCAGCTTCAAGTCTAGCACTTTCCCATTGAGCCATGTGGCTAAGTATGGC
TGCGTTCTTGGTTAAACCGAGAGAAGACAGAGGAGTTTCGTTTTTGGGTTTATGAGTCACTGTTCTCTTCGGCAAATGAGTCGCTA
TCGCCGACCACCTGTTTCCTAAGAGAGCATGGAGTTGAATAATGGTTTGTTCTTATTGTAAGTTGAATTTGCCTCTTTTGATGTCA
GGTCTTAGGTAGTTAGTCCATCTTAGTCTGCAGCTTTTGCCGCATCGGTGAAGACCAGCTTTCTCAGGCAATGAACGCCAACTTCC
ATGTCCATGTTCTTCAATATAAGCCAAAAGTTTCTGATCTTCTTCTTGTGTCCATGGCCCTTTCTTTAAACCCAATTTGTCACAGC
ACGGTGATCTTCCCATTTTATTACACTACTAAGTAGAAGAAGAAGGTAATGAGAGATAATATCACATGATGATGATCATCCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
CBI22245 unnamed protein product [Vitis vinifera]5972e-059
NP_197035 myb domain protein 16 [Arabidopsis thaliana]5425e-053
NP_001078589 myb domain protein 16 [Arabidopsis thaliana]5425e-053
XP_002871660 AtMIXTA/AtMYB16 [Arabidopsis lyrata subsp. lyrata]5425e-053
BAJ34432 unnamed protein product [Thellungiella halophila]5425e-053

Swiss-Prot top hits (Blast detail)Scoree value
Q7XBH4 Myb-related protein Myb44212e-040
Q8GWP0 Transcription factor MYB394015e-038
P27898 Myb-related protein P3925e-037
O49608 Transcription factor MYB323891e-036
P81392 Myb-related protein 3063853e-036

TrEMBL top hits (Blast detail)Scoree value
Q9LXF1 At5g153105423e-053
Q02992 Protein 15227e-051
Q9LE63 Putative Myb-related transcription factor5201e-050
A4GZI1 Transcription factor DcMYB25182e-050
B9IK06 Predicted protein5173e-050

Arabidopsis top hits (Blast detail)Scoree value
AT5G15310.1 ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor5422e-055
AT5G15310.2 ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor5422e-055
AT3G01140.1 MYB106 (myb domain protein 106); DNA binding / transcription factor5045e-051
AT3G02940.1 MYB107 (myb domain protein 107); DNA binding / transcription factor4453e-044
AT1G34670.1 AtMYB93 (myb domain protein 93); DNA binding / transcription factor4436e-044

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  33%
 
122  67%

Unigene MembersMember information