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Information for unigene UN41360

FASTA Sequence
Unigene ID: UN41360Length: 1110 SSR 
TCATCTTCATCTTCACCTTTATGGGGTTGAGCAAGAAAGTGATGATCTCATTTGAATAACTTGCCATTTATAGTCGGAAACTTTCT
ATTTTGAGTTATGAGAGAGGAAGATTCCAACTGGTCTGCTAAATGGGAAGAAGAGCTTCCGTCGCCGGAGGAGCTCATACCGTTAT
CTGTGTCACTAATCACACCTCATCTCGCCATGGCCTTCGATCTCCGAAGCTCTAACCACCGCAACAATGGCAGTTCAGGTCAACAT
CTGCCTCAAACCACTCCGCCACAAGCCGAGTTCGCGGGAGACGAACCAGCTCGGACTCTGAAACGGCAGCGTTTAGTATGGACGCC
GCAGCTGCACAAGCGTTTCGTGGACGCTGTGGCGCATCTCGGGATCAAGAACGCTATTCCCAAAACCATCATGCAGCTCATGAGCG
TCGAGGGGTTGACCAGAGAGAACGTCGCTAGCCATCTCCAGAAGTACAGACTTTACCTCAAGAGGATGCAGTCCGGAGGAGGAGGA
GGAAGAGGAAACGTCGGTGAGTCCGATCATCTCTTTGTGAGCTCGCCTGTTCCTGCACACTTCTTACACCCGACAGCAGTCAGACA
AAGCTCCGACCATTTCATACCGTCTTTTGTCCCGCATCATCAGTTCCTCCACCGGCAAATATCCGCCGTGAAGATGGACCAGTCGT
TGTTTTTGGCTAGGCAGAGTCATCAGCAACCTGTTCTCATCAGACCATCCTCGTTGCATCTGCATAGTCGAGTGGCTAACTACGCA
GATGATTTGGAATCAGGAGGCAAGACGGTCTTGACTCTGTTTCCAACTCGACAAGATTGAATTTTAAACAATTTATAGATTGGAAC
CGTTCACAAAATTCGAGTCCAATCTTTGATGATTCTCTATTTCTATATCAAAATGTCTTTCTCTACAAATATTCAAGGAACATATT
GGCCTCCCCTTTCGGTGTAAAGATTTGAGTTTAGTTGAAAAGATGCATATGTCTAGATTTGATTATGCAAAAGTACTTTACTCTGT
TTCTTTCTTTTGTTTTGTGTGTGTGTTGCATGTCTGCTTTGCAACGAGCAGCATATCATAATAGCATCTGCAGCTGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34510 unnamed protein product [Thellungiella halophila]8221e-085
NP_196128 myb family transcription factor [Arabidopsis thaliana]7584e-078
AAM61358 unknown [Arabidopsis thaliana]7584e-078
XP_002871136 myb family transcription factor [Arabidopsis lyrata subsp. lyrata]7575e-078
BAJ34024 unnamed protein product [Thellungiella halophila]4913e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q9FGT7 Two-component response regulator ARR182312e-018
Q940D0 Two-component response regulator ARR12303e-018
Q9ZWJ9 Two-component response regulator ARR22285e-018
Q8L9Y3 Two-component response regulator ARR142151e-016
P62598 Two-component response regulator ARR122132e-016

TrEMBL top hits (Blast detail)Scoree value
Q8LFK7 Putative uncharacterized protein7583e-078
Q9FF65 At5g050907583e-078
Q9SG82 T7M13.16 protein4813e-046
O22210 Putative uncharacterized protein At2g409704062e-037
A5AMU0 Putative uncharacterized protein3821e-034

Arabidopsis top hits (Blast detail)Scoree value
AT5G05090.1 myb family transcription factor7581e-080
AT3G10760.1 myb family transcription factor4812e-048
AT2G40970.1 myb family transcription factor4069e-040
AT3G46640.1 PCL1 (PHYTOCLOCK 1); DNA binding / transcription factor3333e-031
AT3G46640.2 PCL1 (PHYTOCLOCK 1); DNA binding / transcription factor3333e-031

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  33%
 
112  67%

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