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Information for unigene UN41374

FASTA Sequence
Unigene ID: UN41374Length: 814 SSR 
GAACTGAAACATAATCTTATTCTCGCAATTTCCAGATGGGAACATTAAGACAGACAAAACATGAATAGTTTTACATATTGAAATAA
GCAAAACAAAATGAGAATCAAAAAGAGAAGCAAAGGAAACAATGAGAATAAGTAAGTATTCATAAATGATCATATCATTCATCGTC
TGAGTACTCAAACTTAACTGAATGTGATTGAAGATCGATCTCTCCTCCTCTGTAGCTTCCTCTTTTCTTCTTCGTCTTCTCATGTC
GGAAACCCCTTCCTCTAACTTGCCCTAGAACCTCTTGAGCTTTAGCACAATAACCCGAATCAGCACCACCCTTCGCCCAATAAGAG
TTGTCTTTAAGCCTATCGTCAGTGAACACAACTTCCTCAACGTTCACTCTCTGAAACGGTTTCTTCGGCTCTTTCGAGTCAGAAAG
CCCCTTTCCAGACTTCTTATTAGTTGATTTTGTTTCAACGTTACCGTTCTCCTGAACATCAGTTTGCTTAACAGGCGTTTCTTGAA
CATCCATATCTTCTTCTTCTCCTGCCTTCTTCCTACGTTTAGAGTCCTCATCATCATCATCATCATCATCCTCTGTCTGTTCTTTT
GTCTCTTCTTCAGGCTCTGATCTTTTTCTCTTCTTGGAAACTCTCTCCTCATCACCCAAAGTCTCAGCCTCGGCAGCTTTTGACTT
GGTCTTCTTCTTCTTCTTTTTCTCTTTCTCTTTCACTCCATCTTCTATCTCACCATCAGTTTCTTTGACCTTCTCCTCTTTAGCTA
CCTCCACTTTCGATTCCTTCTTCTTCTTCTTCTTCTTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_200522 uncharacterized protein [Arabidopsis thaliana]7152e-073
AAM61154 unknown [Arabidopsis thaliana]7152e-073
XP_002866185 hypothetical protein ARALYDRAFT_495806 [Arabidopsis lyrata subsp. lyrata]7143e-073
AAK74044 AT5g57120/MUL3_6 [Arabidopsis thaliana]6014e-060
XP_002262877 PREDICTED: hypothetical protein [Vitis vinifera]4697e-045

Swiss-Prot top hits (Blast detail)Scoree value
P41777 Nucleolar and coiled-body phosphoprotein 12768e-024
Q14978 Nucleolar and coiled-body phosphoprotein 12113e-016
P36044 Protein MNN41772e-012
Q55FI4 Nucleolar protein 581648e-011
Q9U7E0 Transcriptional regulator ATRX homolog1631e-010

TrEMBL top hits (Blast detail)Scoree value
Q8LFX8 Putative uncharacterized protein7151e-073
Q9LU74 AT5g57120/MUL3_67151e-073
Q93WC7 AT5g57120/MUL3_66012e-060
B9HAX3 Predicted protein4508e-043
A5C3Y6 Putative uncharacterized protein (Fragment)4354e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G57120.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: nucleolus; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: LisH dimerisation motif (InterPro:IPR006594), SRP40, C-terminal (InterPro:IPR007718); Has 90949 Blast hits to 45608 proteins in 1620 species: Archae - 300; Bacteria - 8281; Metazoa - 37603; Fungi - 8095; Plants - 3374; Viruses - 548; Other Eukaryotes - 32748 (source: NCBI BLink).7159e-076
AT3G28770.1 unknown protein1736e-013
AT1G56660.1 unknown protein1583e-011
AT2G22795.1 unknown protein1494e-010
AT5G15140.1 aldose 1-epimerase family protein1315e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

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