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Information for unigene UN41393

FASTA Sequence
Unigene ID: UN41393Length: 894 SSR 
TAATGGCACTTGAAGCTCTTACTTCGCCAAGATTAGCTTCCCCGGTTCCAACTCTGTTTCAAGATTCTGCCGTTGGCTTCCACGGT
AGCAAAGGCAAGCGATCTAAGCGGTCAAGATCCGACTTCGACCGCAGTCTCACGGAGGAAGAATATATCGCTTTATGTCTCATGCT
TCTTGCTCGGGATGGGAATCGAACCCGTGACCTGCCTTCTTCTTCGTCATCGCCGCCTCTGTTTCCTCCTACTCCTACTACTAGCT
ACAAGTGCAGCGTCTGCGACAAGGCGTTTTCTTCTTACCAAGCTCTCGGCGGGCACAAGGCGAGTCACCGGAAAAACTCATCGCAG
ACTCAGTCTAGCGGAGGAGATGAGAAATCTACGTCCTCCGCGGTAACCATCGCTAGCCACGGCGGCGGCGGCGGAGGAGGAAGTGT
GAGACCGCACGTCTGCACGATCTGTAACAAGTCTTTCGCGACGGGTCAAGCTCTCGGCGGCCACAAACGGTGCCACTACGAAGGCA
AAAACGGCGGGGTTGCAAGCAGTAGCTTGTCCGTTTCTGAAGGCGTGGGGTCCACAAGCCACGTCAGCAGCGGCAGCCATCATCAC
CATCACCACCACCGTGGGTTTGACCTCAACATCCCGCCGATACCGGAGTTCTCGACGGTCAACGGAGAAGAAGAGGTGATGAGCCC
CATGCCGACGACCAAGAAACTGAGGCTCGAGTAGATTCAGCTAGCAGTTTAAATGAAATTTGTTATATACTGTACATATACCAATT
TTTAGATTCCGGTTCGTGTTCTTCTTCATTGAATCAGTATTCCTTCTTTGTTATATTTGTGTAGTTTTCTTGTTTTCTTTAAGTTG
TCGCTTAAAGAAAAAGACCCTCAAACAATTCAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABI74691 C2H2 zinc finger protein [Brassica carinata]10612e-113
BAC43454 putative C2H2 zinc finger transcription factor [Arabidopsis thaliana]9501e-100
NP_196054 putative c2h2 zinc finger transcription factor [Arabidopsis thaliana]9501e-100
XP_002873145 hypothetical protein ARALYDRAFT_908317 [Arabidopsis lyrata subsp. lyrata]9322e-098
BAJ34127 unnamed protein product [Thellungiella halophila]9043e-095

Swiss-Prot top hits (Blast detail)Scoree value
Q42430 Zinc finger protein 13394e-031

TrEMBL top hits (Blast detail)Scoree value
A7J146 C2H2 zinc finger protein10719e-115
O22533 Putative c2h2 zinc finger transcription factor9501e-100
Q8GWG1 Putative C2H2 zinc finger transcription factor9501e-100
A1X3G7 C2H2 zinc finger 2 (Fragment)8031e-083
A0RZH0 C2H2-type zinc finger protein (Fragment)7842e-081

Arabidopsis top hits (Blast detail)Scoree value
AT5G04340.1 ZAT6 (ZINC FINGER OF ARABIDOPSIS THALIANA 6); nucleic acid binding / transcription factor/ zinc ion binding9523e-103
AT1G27730.1 STZ (salt tolerance zinc finger); nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding7132e-075
AT3G19580.1 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding3852e-037
AT3G19580.2 AZF2 (ARABIDOPSIS ZINC-FINGER PROTEIN 2); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding3852e-037
AT5G67450.1 AZF1 (ARABIDOPSIS ZINC-FINGER PROTEIN 1); DNA binding / nucleic acid binding / transcription factor/ transcription repressor/ zinc ion binding3799e-037

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
212  67%
 
201  33%

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