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Information for unigene UN41416
| FASTA Sequence |
| Unigene ID: UN41416 | Length: 1039 |
SSR | | GCAAAATCAATGATTTTCCTTCTTAATAACGAATCCGTGAATGCTCTTTTATTACAAAGTCTTGGGGGCTATATAAGTAAACATGA
AGCTAAAATGCTTTTATCATAACGTGTTTTCCTTTCAAAGGGTAAGGTTTTAAAGAAAAGGAACAAAAAAATGGTTTAATCTTTTA
GGGAGGACTAGTTTCCTCATTCATAGCTTCTTGACAATTTCTTCACAAGCTCGCTCGTAATAAGTCATTCTCTGAATACATTTTAC
AGCTTCATCAAACCTGTGGCTTTCAAAGGCTTCGACAAAAGAGTCAGACCATTTGTTCAGTTTCTCTTGTACCTTGGATCGGATCA
GGTCTAACTCTTTTGAATCATTTGCTTCCGCAATGGTCTCTCTGAGTTCCATAATCTCCATTAACAAGGTTGGATCTGTTATTGTT
TCTTCTTCATTGACATTTTTGCCATTCAGCTTCATGATATACATTGCTCTTGAGAGTCGCTTGGTTAACGTCCGGTATGCTTCAGT
CACCTTTGCAGACTGGTCCGCTGCGAAATCTCTTTCTTTCAGAGATTTGTTGTGAACTAAATCAGGATGAAGCTTCTTTTGCCAGT
CTTTGTAAATGCCTTCAAGGCTCCCACTATCTAACTCATACTTCTTCTCCAAGCCAAATATCTGAAAGTAATCGACGGAACCATCG
ACGGGTTGAATGGTGCGGCACGATTCACAGAACAAAAACGCAGCTGAGCCACAGTTCCAGCACACGGAGGAGCTTCTGCAGGATCC
CTCCGAGCAAAAACCTCTACCGGGAAATCGGAGCCCCAGGGGGGGTTTATTAGCAGCTGAAGAAGAAGAAGAAGATTGCAGAGATT
GGCGGATCAAGTGAGTTTGTGAATTATTCGAGAGTGGATTGCACCCGAGAGTAGAAGAAGAAGAAGAAGGAGAATATGATCGTCTT
GTTAAAAGGGTGGAGACTGAAGCCACCAGCTTCCTCCTTGCTCCGTTCATTTGGGGGACGACGAGAAAGAAAGAGAGACAAGGTCA
GGCTCCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002873254 hypothetical protein ARALYDRAFT_487450 [Arabidopsis lyrata subsp. lyrata] | 916 | 2e-096 |
| BAB08963 unnamed protein product [Arabidopsis thaliana] | 860 | 5e-090 |
| NP_196259 molecular chaperone HscB [Arabidopsis thaliana] | 860 | 5e-090 |
| XP_002333468 predicted protein [Populus trichocarpa] | 653 | 5e-066 |
| NP_001066729 Os12g0456200 [Oryza sativa Japonica Group] | 635 | 6e-064 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8IWL3 Iron-sulfur cluster co-chaperone protein HscB, mitochondrial | 305 | 5e-027 |
| C1DE65 Co-chaperone protein hscB homolog | 228 | 4e-018 |
| O69220 Co-chaperone protein hscB homolog | 221 | 3e-017 |
| B4EZU5 Co-chaperone protein hscB | 210 | 5e-016 |
| B3R474 Co-chaperone protein hscB homolog | 203 | 3e-015 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8L7K4 Putative uncharacterized protein At5g06410 | 860 | 3e-090 |
| Q9FNG7 Genomic DNA, chromosome 5, P1 clone:MHF15 | 860 | 3e-090 |
| B9NDY3 Predicted protein (Fragment) | 653 | 3e-066 |
| A2ZK93 Putative uncharacterized protein | 635 | 4e-064 |
| Q2QRM4 Co-chaperone Hsc20 family protein, expressed | 635 | 4e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G06410.1 DNAJ heat shock N-terminal domain-containing protein | 861 | 1e-092 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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