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Information for unigene UN41429
| FASTA Sequence |
| Unigene ID: UN41429 | Length: 1156 |
SSR | | GTTTCTGATTCTGACGACGACCTTTGACCGCAAATCGTCTCGCAGATAGCAGTTGAGAGCCTTCTAAATCGTTTCGGGAATGGATA
AAGGAGCACCTCCTCCTCCTCCTCCTAGCATCTTTGTGAACGATGGGTCCTTCATGGAAAGATTCAGACAGCTTCAACAGGAGAAG
AAAGATGAAGCCAAGGATAAGGCTCCGGAGTCCAAGCCTGTGAAGATTATTATATCTGGGGTTTCTAATCCTAAGCCTTCTTCTTC
TTCTGCTACTAAGACTTCCATTGGGTTTAAGACCAATGATGCCCAGAAAAAAGGTGGTAAGCTTGCCTTCAGCTTGAAGCAAAAGT
CTAAGCTTCTCGCACCTCCTGTGAAGCTTGGCGAAGAAGAGGATTAGGAGGATGTGCAGAATGATCAAAGCTTCGGATCTGCTAAG
CGTCCAAAGTTAGACGCGCCTGCCAAGTCAACCAAACTGTCAGATGTTGTTGTTGCACCTCCTGCGCCCAGTGACCCTAATGTGAA
GAATGCTGCTGACAAATTAGCAAGCTTTGTTGCTAAGAATGGAAGGGCATTTGAGAATGTTACACGCCAAAAGAATCCTGGGGATA
CACTATTTAAGTTTCTTTTTGATGAGAGCTGTGCTGATTACAAGCAGATAATGTGGGACATAAGCTCTTGTCAAAAATGGGTTGGA
AAGAAGGTGAAGGTATAGGAAGCTCTAAAAAGAGTATGGCAGACCCGATAATGGCAGGCGATGTAAAGACTAACAACTTGGGAGTT
GGGGCTTTTGCTCCAGGAGAGGTTAACCCTGAAGATGATATATACGAGCAGTACAAGAAGCGAATGATGCTTGGTTACAAACACAG
ACCCAACCCACTGGGAAATCCAAGGAAAGCTTATTATTAAGAACCATTCAGTGTGCTGCAGACAATCATGAGCTATCTCTCACCCC
ACCAAGCCCCAGCTGATTTTTGCTTTTTTATTAAAAGATATAATGTTTTTGTTTGGTTTTGGATTTGGATTGTTTGCAAATAGATC
TATATCAGTTGGGATTGGAATTGACTGAGATTTCTATTTTTATTTCTTTGTTATAATGTTTTTGAAGACCGGTACAATAACAATCT
CAACAGTGTATTTATTAGAGTGGAAGAAGGTAAATGAG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_566957 Splicing factor 4-like protein [Arabidopsis thaliana] | 441 | 2e-041 |
| ACA24495 gamma reponse I-like protein [Cucumis sativus] | 411 | 7e-038 |
| XP_002513189 arginine/serine rich splicing factor sf4/14, putative [Ricinus communis] | 397 | 3e-036 |
| XP_002314024 predicted protein [Populus trichocarpa] | 385 | 7e-035 |
| CAN62489 hypothetical protein VITISV_035536 [Vitis vinifera] | 382 | 2e-034 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q94C11 Splicing factor 4-like protein | 629 | 2e-064 |
| Q8IWZ8 Splicing factor 4 | 248 | 2e-020 |
| Q8CH02 Splicing factor 4 | 243 | 9e-020 |
| Q68FU8 Splicing factor 4 | 243 | 9e-020 |
| Q8CH09 Putative splicing factor, arginine/serine-rich 14 | 140 | 8e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H4X1 Uncharacterized protein At3g52120.2 | 629 | 2e-063 |
| A5AHH4 Putative uncharacterized protein | 466 | 2e-044 |
| B9HNL7 Predicted protein | 426 | 8e-040 |
| B9GFQ8 Predicted protein | 417 | 9e-039 |
| B3TLK2 Gamma reponse I-like protein | 411 | 5e-038 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G52120.1 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | 629 | 1e-065 |
| AT3G52120.2 SWAP (Suppressor-of-White-APricot)/surp domain-containing protein / D111/G-patch domain-containing protein | 629 | 1e-065 |
| AT3G52350.1 D111/G-patch domain-containing protein | 117 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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