 |
Information for unigene UN41461
| FASTA Sequence |
| Unigene ID: UN41461 | Length: 1137 |
SSR | | CTCTCCCTCTCTCTCTCTCTCTACTTTCCCAACTTCGTCGCCAAACAGTTAACTTGTCGTGTAATAGAAGAGTTAGTTGTTGTAAT
CATGAGCTGTTTCGGTTGGTGTGGGAACGATGATGGTTTCCGTAATGCTGATGATACTAGACCAATGCCAACCCTCATCCCTGCAG
GTGACAGTGGAAGCCACTATCTAAGATCTGATCCACCCATGAATCAGCCTGTTCTTCAGATGGAGCCTATTGCTGTACCAGCCATT
CCTGCTGATGAGCTGAGTGATGTAACAGATAACTACGGTTCCAAGGCCTTGGTCGGTGAGGGTTCTTATGGAAGGGTGTTTCACGG
TGTTCTTAAAAGCGGTGTAACATCTGCTATCAAGAAACTTGACTCTAGCAAACAGCCTGACCAAGAGTTTCTTTCCCAGATATCAA
TGGTTTCGAGACTGCGACACGAAAATGTTATTGCACTTGTGGGTTATTGTGTTGATGGCGCTCTCCGTGTTCTTGCTTATGAGTAT
GCTCCTAACGGATCTCTTCATGATGTTCTTCATGGTGAGTGATTCACGTTTTTATGGATTAGTCTCACTCGAGAGTTGAAGATATT
GAAACTATGGTACCTTTTATGGATTAGTCTCCAATCAAGCGCCTGACATGGCTGTTCGGCTTCACTCGACTCGTGTCCTAGGAACC
TTTGGCTATCACGCTCCTGAGTAATCCCCCTTTTTGTACATTTTCAGTTTTGTTTCATTCAAACAAATCATCTTGGTTGTCTTGCT
CAAACATTGTTTTCTACTTGCCTCTCTTCTCACAGTTGAATGTTGAGCTTAAACATTGTTGGGTCATGTGTTTCAGGTATGCAATG
ACGGGAACGTTGAGCACAAAGAGCGACGTGTACAGTTTTGGCGTTGTTTTGCTGGAGCTCCTTACTGGTCGTAAACCAGTCGACCA
TACCTTACCTCGTGGACAACAAAGTCTAGTGACAATATGCAGAAGTCCTCCAAGTCTGTCTGTTCAAAGTAGCTAAAAGCTGTACA
AACTACTTTTTCTGAATTAATTTTACATATAATTCAAAAAAAAAATGTTTAGTTATAACTTAGAAGCCACATTCTGTTTTTTCTTA
CCTTGTACTTGAAAATACC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_175255 serine/threonine protein kinase [Arabidopsis thaliana] | 646 | 4e-065 |
| AAF79541 F21D18.6 [Arabidopsis thaliana] | 646 | 4e-065 |
| AAK96869 similar to Pto kinase interactor 1 gb|AAC61805.1 [Arabidopsis thaliana] | 640 | 2e-064 |
| XP_002891418 predicted protein [Arabidopsis lyrata subsp. lyrata] | 636 | 5e-064 |
| NP_188367 putative serine/threonine protein kinase [Arabidopsis thaliana] | 604 | 3e-060 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q41328 Pto-interacting protein 1 | 499 | 2e-049 |
| O80719 Probable receptor-like protein kinase At2g47060 | 451 | 7e-044 |
| P93749 Probable protein kinase At2g41970 | 307 | 3e-027 |
| Q6R2J8 Protein STRUBBELIG-RECEPTOR FAMILY 8 | 217 | 9e-017 |
| C0LGU1 Probable LRR receptor-like serine/threonine-protein kinase At5g37450 | 216 | 1e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LNH4 F21D18.6 | 646 | 3e-065 |
| Q93Y19 Similar to Pto kinase interactor 1 | 640 | 1e-064 |
| Q9LUT0 Putative uncharacterized protein At3g17410 | 604 | 2e-060 |
| Q9SX57 F11A17.22 protein | 559 | 3e-055 |
| B2CZJ8 Pto kinase interactor 1 | 499 | 3e-048 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G48210.1 serine/threonine protein kinase, putative | 646 | 1e-067 |
| AT1G48210.2 serine/threonine protein kinase, putative | 646 | 1e-067 |
| AT3G17410.1 serine/threonine protein kinase, putative | 604 | 1e-062 |
| AT1G48220.1 ATP binding / protein kinase/ protein serine/threonine kinase/ protein tyrosine kinase | 559 | 2e-057 |
| AT2G47060.1 serine/threonine protein kinase, putative | 451 | 6e-045 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
