Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN41464

FASTA Sequence
Unigene ID: UN41464Length: 651 SSR 
GGGCCTTCCAGAGAGAGAGAGAGAGATAAGGTTTCGCATCTCTCAACTCTTTCTTCCTCTCTCCCCTTTCTCTCTCTAGCCGCCGT
TCAATGCTTCGGTTTCGATTCTCCTCTTCCCCTTGACTTCTTCTCTTTTTGCTGCAAGAGAAAAAGTGTAAGAAATCGAAGCTTGA
GTGAGGTCAACGACATCCCTCCCCTTTAATCTCATGGACCCAGCAGTCAGAGAATGTTAAGTTCGAGCACATGAAAGTTTCAATCA
AGACTCGGCCTTCTAAAGGGTCTGGATACGAAGGTGGGGAAGTGGAGAAGAGACGTGGTCCTCTCAGGAGTGTGGAAGAGAGGAAA
GAAGACTATGACAGGGCTCGAGCAAGGATATTCAATGGTCTCACGGGCTTCACTGGTGATGAATCTGAATCTGAAACTCAGGTTTA
TGAGAGGAGAGATGACAGTCAGGCATCTAAGAGCTTAAGCGTGAGGGAGACCGGTCCAACATCTCGTGTTGCGATCCTTAGAGACA
GTGAGAAAGATCGTTTTGATCCTGATTATGACCGCAACTACAAAAGGTACATTAGGAGCCTTCCGGTTAATCAGAGTTTCAATGTA
CCACCACCCTTCAACATGATGCAGCAGCAACCATATTACCAAATGGGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191227 Single-stranded nucleic acid binding R3H protein [Arabidopsis thaliana]3092e-026
XP_002876378 hypothetical protein ARALYDRAFT_486108 [Arabidopsis lyrata subsp. lyrata]3082e-026
XP_002879898 hypothetical protein ARALYDRAFT_483163 [Arabidopsis lyrata subsp. lyrata]2445e-019
XP_002283240 PREDICTED: hypothetical protein [Vitis vinifera]1972e-013
XP_002322608 predicted protein [Populus trichocarpa]1773e-011

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LET8 AT3g56680/T8M16_103091e-026
Q9SG83 Putative uncharacterized protein At3g107702686e-022
Q8LBM0 Putative uncharacterized protein2651e-021
O22209 Expressed protein2256e-017
Q8LD07 Putative uncharacterized protein2256e-017

Arabidopsis top hits (Blast detail)Scoree value
AT2G40960.1 nucleic acid binding3511e-033
AT3G56680.1 nucleic acid binding3097e-029
AT3G10770.1 nucleic acid binding2684e-024
AT3G10770.2 nucleic acid binding1628e-012
AT5G05100.1 nucleic acid binding1555e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  50%
 
121  50%

Unigene MembersMember information