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Information for unigene UN41473

FASTA Sequence
Unigene ID: UN41473Length: 787 SSR 
GCTGAACATGATTTGATCAATCCACACTTGAAAAAAAAAACAAAGAAAGATAGTTCAAAAGTAAAACCAAAATAGTACAATTACAA
CCTCGCATGGTTCATAAGTGTTGAAGAAACAAAACAACTTAGCGAACTGAGTTGTCTTCTTTTTATTGTCATTAACCTCCTTCACT
CAGGATAAGAGAGCATTGTGATAAGCGACTCGTGCTGAGGAAACAGCGATAAGAGGTGAGAGCGTTTCGCAAGCTCAAAGTCCTCG
AACTGGAAACCAGGAGCGCAGGTGCATCCAACAAGAGAGAAATGGTTCTCGGAGTCTCTAGCCTCGGTTCTAAGCAGAGTCCCCTC
GTGAGGGAAATGAAAATCCTTTGTCGGAAACGAACCAAACCAGATGTTTGGAGGGACAGTGTACTGAGGCTTCTGGTCGCCTTCAA
TCAGGTCAGGACCAAGACACGTGAATTTTAGCTTCCCATCGTCGTGGATCTCCACTACAGTGAGAGGTTCACCCAAATAGAAGTGC
CAGGTTTCAGCCATTGGAATGCGATGAAGACGTGAAACGTTACCAGAAGGAAGCAAGAAGTAGATGCTTGTGCTCACAGCTCTGTC
CACCTTGAAAGTGGGTGGGAGATGAGAGGTGGAGAGGATAACAGAAGAATCTCTGAACGTTTCATAGAAGAAACCACCTTCTTGGT
GAGACCTGAGATTCAGCTTCTTCACGATTTCTGAAGACTTCACCATCTTTCCCCCGATATTCACCGACAGACTCTCTCTCTCTCTC
TCTCTCTCTCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_564073 uncharacterized protein [Arabidopsis thaliana]9071e-095
AAF79298 F14D16.29 [Arabidopsis thaliana]8854e-093
XP_002893029 F14D16.29 [Arabidopsis lyrata subsp. lyrata]8782e-092
XP_002326291 predicted protein [Populus trichocarpa]6677e-068
ACU14696 unknown [Glycine max]6605e-067

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8GYZ3 Putative uncharacterized protein At1g19130/F14D16_189077e-096
Q9LMB4 F14D16.298853e-093
A9PDS6 Predicted protein6675e-068
C6SZM3 Putative uncharacterized protein6603e-067
C5YLT8 Putative uncharacterized protein Sb07g0222906041e-060

Arabidopsis top hits (Blast detail)Scoree value
AT1G19130.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF985 (InterPro:IPR009327), RmlC-like jelly roll fold (InterPro:IPR014710); Has 778 Blast hits to 778 proteins in 280 species: Archae - 8; Bacteria - 513; Metazoa - 2; Fungi - 16; Plants - 22; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).9084e-098

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  33%
 
84  67%

Unigene MembersMember information