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Information for unigene UN41496

FASTA Sequence
Unigene ID: UN41496Length: 863 SSR 
GGGAGATCCCAAAAAGAATCAATCAGATGCCGTACTACACCAAAGACGACGCTGACGTGGATGACTTCGACGAGTACGACCCGACG
CCGTATAGCGGAGGCTATGACATCACCGTGACGTACGGCCGCCCACTCCCGCCGTCAGACGAGAACTGTTACCCTCTCTCGTCTCT
CTCCGGTGACGCCTTCGAGTACCAGAGGCCCGTGTTTTCATCAAGCCAGGAGCCTTCTGCTTATGGCGACCAGGCTCTCAACACCG
AGTACAGTAGCTACGCTCGGCCCAAAACCAAACACGGTGGGAGAAAGGAGAACGAGGGAGATCACAAGAAAGCCAGTCGCAATGAT
GATGATGATAACAAAGAGAGCCAAAGCCACAAAAAATACAGTGGCAAGGTCGACACTGATGATGAGAAGAGCAAAACGAAGGAGAA
GAAGAAGGATAAGAAGAAAGATGATGATGATGATGATTATGAGAAGAAAAAGAAGAAGGACAAGGACCATGATGATGATTGTGATG
AGAAAAAGAAGAAGAAGGATCATTACGACAATGATGATGAGAAGAAGAAGAAGAAAGACTATCGTGATGGCTATGATGAAAAGAAG
AAGAAGAAGGACCATCATGATAGTGATGATGAGAAGAATAAGAAGAAGGATCACTACAAGCACAAAGGACATCGTGAATACGATGA
CTAAATAACCTTCTTTTGCTCCGGGAGTACATCTCTTTTAAGTTTCTAACACTAATTAAGAAACCAACGCACACTTTTCTATTTTA
AGTTTATGTCAAATGTTATTATGTTTCTTGCTTCGAAATTCTGCTATTAAGACATCAAGAAGCCATGATATTATATGCATTACAGA
AAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877154 predicted protein [Arabidopsis lyrata subsp. lyrata]7028e-072
NP_189551 glycine-rich protein [Arabidopsis thaliana]6794e-069
AAM78108 AT3g29075/MXE2_1 [Arabidopsis thaliana]6392e-064
AAS76703 At3g29075 [Arabidopsis thaliana]5566e-055
NP_568565 uncharacterized protein [Arabidopsis thaliana]3962e-036

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKA5 Uncharacterized protein At5g395703961e-037
Q55FI4 Nucleolar protein 581801e-012
A5E4P1 Protein PXR11782e-012
A7TG30 Protein PXR11721e-011
P36044 Protein MNN41711e-011

TrEMBL top hits (Blast detail)Scoree value
Q9LJV8 Gb|AAF16629.16792e-069
Q8L7V6 AT3g29075/MXE2_1 (Fragment)6391e-064
Q6NLC5 At3g290755564e-055
B9SVI7 Putative uncharacterized protein3235e-028
A2DBT6 Putative uncharacterized protein3021e-025

Arabidopsis top hits (Blast detail)Scoree value
AT3G29075.1 glycine-rich protein6791e-071
AT1G11440.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: glycine-rich protein (TAIR:AT3G29075.1); Has 22740 Blast hits to 8622 proteins in 417 species: Archae - 22; Bacteria - 573; Metazoa - 11353; Fungi - 2147; Plants - 905; Viruses - 631; Other Eukaryotes - 7109 (source: NCBI BLink).1664e-012
AT1G56660.1 unknown protein1664e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  50%
 
122  50%

Unigene MembersMember information