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Information for unigene UN41504

FASTA Sequence
Unigene ID: UN41504Length: 1160 SSR 
AAAGCTCAGCCTTATTATCACAAACATTCAACTTTGTCAAAGTACATGGAACAGTTCACACAATTCAAAAGGAGAAGAACAGAGAG
AGACTAATATGGGACGTTATTGGGCAAGTTTCTTATGACATTACTCTTCATTGCCATCTTGGTACGCATTGTCTCGCCTCTCTTGT
TCATCTCTTTGAGCGCTTTCCTCTTCACTCTATCCTCTTTCGTTGGCACCGTCTTCAGACCAAGGCTCTTGTACCTTGAAGACAGA
GAGGCAACAATCTGGTTACTGTTGTGAGAACTTGGGCGCGGCTTCTGTCTATAGTAACGCATGAATTCACGGGACCCTAGAGTCCT
AGACGTTGTTGTGTTCTCAGATCTCTCAGTGATCACGAGCTCAGAACCACCAACTAGTTCTACAGCGTTGTCTGTTTCACCAGCCA
CGACTATCTGGTCTCCAGTTTCATCAACGTAGCTGCTGCTGTAGTCGTAGAACTCTTCTAGTTCAGCATCTTCCTCGTCATCACCA
TCACCATAATGCAATTTGCAATGACTCTTTGCTTCCATATGCTTTCTCACAGCTTCTAAGCTGCTGAACGCATGGCACAGCTCACT
GCAGTAGAGACACATGAAGTCTCTCTTGACCTTAAGACCGAGGTAAGTGAGAAGGCCTTCTGGATCTTTTAGATACTCAACATCCG
GAACGAAGAAACCATGGTGCTTATGCATGTGAACCATACAGCTCTCTAAGGTCTTATGTTTCTTCTCACACATCAAACAGGAGGTC
GGATCCAGCTCATACTTGTCTTCATCAGCTCCTGACTCATTCACATTCAACTTAGACAAAGAATCCAAGGCTTCTTCAGCATCAGC
CAGTTCCTCGTCTGAATCAGCCTCCACCCACTCATCATCATCATCATCATCACTCTCCTCGTTATCCCTGTTCCTGAAACGGCGAG
TAAGTGGCGTGACTATCGCTACATCCTCATCACCGTTGCTTGTTCCCCCCTGCGAAACCCGCAAAACGTGGCTCCGAGACTTGAGA
TGCTGCTCATGAGCCTTGGAGCTCCTGTAACCTTTGCCACAGGCTCCGCACGTGTAAAGCATAGGGGTTTCATCTGATTTGCCTTT
CTTCTCCAGAGCAAGTGCAGATTGTCTAGCCTCAAATAACTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
BAJ34316 unnamed protein product [Thellungiella halophila]15481e-169
AAK44084 putative zinc finger protein [Arabidopsis thaliana]14932e-163
NP_567875 Zinc finger protein 622 [Arabidopsis thaliana]14932e-163
NP_974652 Zinc finger protein 622 [Arabidopsis thaliana]14816e-162
XP_002867303 zinc finger family protein [Arabidopsis lyrata subsp. lyrata]14556e-159

Swiss-Prot top hits (Blast detail)Scoree value
Q969S3 Zinc finger protein 6223324e-030
Q91VY9 Zinc finger protein 6223235e-029
Q90Y35 Zinc finger protein 6222975e-026
Q7TM96 Zinc finger protein 6222931e-025

TrEMBL top hits (Blast detail)Scoree value
Q8H1G5 Putative zinc finger protein15083e-165
Q94K64 Putative zinc finger protein15012e-164
Q3E9T5 Putative uncharacterized protein At4g31420.214967e-164
O49591 Putative zinc finger protein13041e-141
Q9ZQ18 C2H2 zinc finger protein FZF11723e-126

Arabidopsis top hits (Blast detail)Scoree value
AT4G31420.1 zinc finger (C2H2 type) family protein15091e-167
AT4G31420.2 zinc finger (C2H2 type) family protein14973e-166
AT2G24500.1 FZF; transcription factor11792e-129

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
191  33%
 
211  33%
 
201  33%

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