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Information for unigene UN41546
FASTA Sequence |
Unigene ID: UN41546 | Length: 1050 |
SSR | | ACCAGAATCTTCTCTGACTCATTACATTCCATTTATCACTTCAATTCCCTAGAGAAAAAAAATGTCGGCAGCAGAGGCAGAGAACA
TCCCCACCATCGTCTCCTCAGGAGATGCTAAAGCGAAGAAGACGAAGGAAGCTAAACCTAAGAAGAAGCCTGCAGTTGCAGAGAAG
AAGGCTCCGAAGAAGAAAGCTTCTTCCTCTCCTCCATCTCACCCTAAATACGAAGAGATGATTAAAGATGCAATCACGACGTTGAA
AGAGAGGACCGGATCTAGCCAATATGCGATTCAGAAGTTCATCGAGGAGAAGGAGAAGTCTCTTCCTCCTACCTTCAGGAAGCTTC
TCCTCGTCAATCTCAAGAGGCTCGTCGCTGCTGAGAAGTTGGTTAAGGTCAAAGGATCTTTCAAACTTCCCTCTGCCAAATCCGTT
GCAGCAGCAGCAGCAGCAGCTAAACCGGCGGCGGTTAAGAAGAAACCAGCGTCTGTATCTAAACCTAAGGCTCCGGTTAAAGCTAA
ACCGGTAGCTAAAGAAACTAAGAAGCCTGCTGCAAAGCCAAAGGCTAAAGTTGTTGCTGCTAAGCCTAAAGCGAAGACAAAGAGCG
TTGCTGTTGTGTCCAAGACCAAAGCTGTTGCGGCTAAGCCTAAGGCTAAGGAGAGACCTGCGAAAGCGGCGAGGACTTCGAGTAGA
ACGTCGCCGGGGAAGAAGGCTGCTCCTGTTAAGAAAGCTGTGGCTGCTGCGACGAAGAAGAAGGCTCCGGTTAAGAGTGTGAAGTC
TCCGGCGAAAAGGGCTTCTACGAGGAAGGTGAAGAAGTGAAGATGATTTGGGTTTTATAGGGTATGGTGATGGTTTAGCTTCTTTA
GGGTAGTCTTGTATAATTGAATCATCCTTGAAGGGGCTTTGCTTTTCCATAGTTTTTTTTTACTTTCTTTCTGGTTTCTTCTTGAA
ACCTTGGTTCTTGTAATTTTTTTTTTGTTTTGTCTGAAATGAAAGCCCTTTCTAATCAATAGCTAAATGTGATGGTGTCTTCATTC
CAAGGTTTTGTTAGGTTT
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GenBank top hits (Blast detail) | Score | e value |
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata] | 736 | 1e-075 |
NP_172161 histone H1.1 [Arabidopsis thaliana] | 618 | 6e-062 |
CAA44312 histone H1-1 [Arabidopsis thaliana] | 601 | 5e-060 |
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata] | 593 | 5e-059 |
NP_180620 histone H1.2 [Arabidopsis thaliana] | 543 | 3e-053 |
Arabidopsis top hits (Blast detail) | Score | e value |
AT2G30620.1 histone H1.2 | 726 | 7e-077 |
AT1G06760.1 histone H1, putative | 619 | 2e-064 |
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 218 | 5e-018 |
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding | 182 | 8e-014 |
AT1G49950.3 DNA-binding protein, putative | 136 | 2e-008 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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