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Information for unigene UN41546

FASTA Sequence
Unigene ID: UN41546Length: 1050 SSR 
ACCAGAATCTTCTCTGACTCATTACATTCCATTTATCACTTCAATTCCCTAGAGAAAAAAAATGTCGGCAGCAGAGGCAGAGAACA
TCCCCACCATCGTCTCCTCAGGAGATGCTAAAGCGAAGAAGACGAAGGAAGCTAAACCTAAGAAGAAGCCTGCAGTTGCAGAGAAG
AAGGCTCCGAAGAAGAAAGCTTCTTCCTCTCCTCCATCTCACCCTAAATACGAAGAGATGATTAAAGATGCAATCACGACGTTGAA
AGAGAGGACCGGATCTAGCCAATATGCGATTCAGAAGTTCATCGAGGAGAAGGAGAAGTCTCTTCCTCCTACCTTCAGGAAGCTTC
TCCTCGTCAATCTCAAGAGGCTCGTCGCTGCTGAGAAGTTGGTTAAGGTCAAAGGATCTTTCAAACTTCCCTCTGCCAAATCCGTT
GCAGCAGCAGCAGCAGCAGCTAAACCGGCGGCGGTTAAGAAGAAACCAGCGTCTGTATCTAAACCTAAGGCTCCGGTTAAAGCTAA
ACCGGTAGCTAAAGAAACTAAGAAGCCTGCTGCAAAGCCAAAGGCTAAAGTTGTTGCTGCTAAGCCTAAAGCGAAGACAAAGAGCG
TTGCTGTTGTGTCCAAGACCAAAGCTGTTGCGGCTAAGCCTAAGGCTAAGGAGAGACCTGCGAAAGCGGCGAGGACTTCGAGTAGA
ACGTCGCCGGGGAAGAAGGCTGCTCCTGTTAAGAAAGCTGTGGCTGCTGCGACGAAGAAGAAGGCTCCGGTTAAGAGTGTGAAGTC
TCCGGCGAAAAGGGCTTCTACGAGGAAGGTGAAGAAGTGAAGATGATTTGGGTTTTATAGGGTATGGTGATGGTTTAGCTTCTTTA
GGGTAGTCTTGTATAATTGAATCATCCTTGAAGGGGCTTTGCTTTTCCATAGTTTTTTTTTACTTTCTTTCTGGTTTCTTCTTGAA
ACCTTGGTTCTTGTAATTTTTTTTTTGTTTTGTCTGAAATGAAAGCCCTTTCTAATCAATAGCTAAATGTGATGGTGTCTTCATTC
CAAGGTTTTGTTAGGTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002879272 hypothetical protein ARALYDRAFT_481979 [Arabidopsis lyrata subsp. lyrata]7361e-075
NP_172161 histone H1.1 [Arabidopsis thaliana]6186e-062
CAA44312 histone H1-1 [Arabidopsis thaliana]6015e-060
XP_002892357 expressed protein [Arabidopsis lyrata subsp. lyrata]5935e-059
NP_180620 histone H1.2 [Arabidopsis thaliana]5433e-053

Swiss-Prot top hits (Blast detail)Scoree value
P26568 Histone H1.16183e-063
P26569 Histone H1.25431e-054
P08283 Histone H15162e-051
P37218 Histone H14812e-047
Q9M5W4 Histone H14444e-043

TrEMBL top hits (Blast detail)Scoree value
B9H8I5 Histone H15073e-049
B9S4U0 Histone h1/h5, putative5047e-049
B9GS56 Histone H15011e-048
Q9AT18 Histone H1 (Fragment)4851e-046
Q6ZYF1 Histone H14841e-046

Arabidopsis top hits (Blast detail)Scoree value
AT2G30620.1 histone H1.27267e-077
AT1G06760.1 histone H1, putative6192e-064
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding2185e-018
AT2G18050.2 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1828e-014
AT1G49950.3 DNA-binding protein, putative1362e-008

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
85  100%

Unigene MembersMember information