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Information for unigene UN41558

FASTA Sequence
Unigene ID: UN41558Length: 933 SSR 
AAAATCAGAAAGCTCATCACCTTCCTCTGTTTCTCTCTCTCTCTCAATCCATGGATCCTTCTTTCTCTGCACCCAACGATCCTCAC
CACCCTCCTCCCTTCCCGCTTTCCCAAACCCCTTCCCCGTCACCCAACACCCCTTCTACAGCAACCCCGTTAACTCCTCCCCCGTC
GCGCCCCCTAACAACAACAACCAGTTCTTCCAACCGCCGCAGCCGCATCCAACATGGGTTCACCCTCCTTACTCCGAAATGATCTG
CACTGCGATAGCTGCGTTGAACGAAGCAGAGGGGTCGAGCAAGCAAGCGATATCGAGGTACATCGAGAGAACGTACACAGGGATAC
CACCTGCTCATAAAGCTCTCCTGACTCACCATCTCAAGTCTCTCAAGACCAGCGGCGTCCTCGTGATGGTCAAGAAGTCCTACAAA
CTAGCTCTTGAACCACCACCTCCTCCCAGATCTGACAATTCAGTCAACGAGATGCAAGATCTCGCTCCGACATCTACTCAGAAGAA
GCGCGGTCGTGGTCGTCCTCCAAAGGCGAAACCTGATGATGCTGTTCAGACCAACGGAAAAGAGTTACCTGTTTCTCGACCGGAGG
AGAATATACAGCCGTTACCGCCGCCGCAACCGCAACTTCAGCCGGTGGTTAAGAGGCCACCGGGTCGTCCTAGGAAAGATGGAACT
TCTTCCCCGACAGTGAAGGCTGCTCCTGTTTCCGGCGGTTCGGAGATAGCGAAGCGAAGAGGTCGCCCCCCGAGCGGAAGAGCTGC
TGGGAGGGAGAGGAAGCCAGCTGTTGTCTCAGCTCCGGTTTCTCTGATCCCGTACGTTGCCAACGGTGGTGTCAGACGCAGAGGAA
GACCGAAGAGAGTTGACGCTGGTGCTTTGCCACCACCGCCTAAAGCAGAGGTTGGAGGAGGATCACAGGTTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894121 hypothetical protein ARALYDRAFT_474000 [Arabidopsis lyrata subsp. lyrata]8552e-089
AAG50847 hypothetical protein, 3' partial [Arabidopsis thaliana]4653e-044
AAF79708 T1N15.25 [Arabidopsis thaliana]4653e-044
NP_175295 high mobility group A5 [Arabidopsis thaliana]4653e-044
XP_002894174 predicted protein [Arabidopsis lyrata subsp. lyrata]4133e-038

Swiss-Prot top hits (Blast detail)Scoree value
P27806 Histone H11891e-013
P37218 Histone H11692e-011
Q10370 HMG-Y-related protein B (Fragment)1622e-010
Q00423 HMG-Y-related protein A1513e-009
P54671 Histone H11479e-009

TrEMBL top hits (Blast detail)Scoree value
Q4V3D1 At1g486204652e-044
Q9C6X5 Putative uncharacterized protein F9P7.3 (Fragment)4652e-044
Q9LP61 T1N15.254652e-044
Q9LSK7 At3g180353836e-035
Q40451 DNA-binding protein3182e-027

Arabidopsis top hits (Blast detail)Scoree value
AT1G48620.1 HON5 (High Mobility Group Family A 5); DNA binding4651e-046
AT3G18035.1 HON4; DNA binding3833e-037
AT2G18050.1 HIS1-3 (HISTONE H1-3); DNA binding / nucleosomal DNA binding1316e-008
AT1G63480.1 DNA-binding family protein1272e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
201  33%
 
181  33%
 
211  33%

Unigene MembersMember information