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Information for unigene UN41594
| FASTA Sequence |
| Unigene ID: UN41594 | Length: 845 |
SSR | | GGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGACATAAACCGAAGTCTGAATCTAGGAACCAGATCAAAAACAAACACAA
CCAGAACGAGAAAAACCTTCTTTGTCGGTGAGATTCAGACATGCCTCCTGTTGGTCCTCGTTCCGGTGATGCCATCTTCTCCAGCA
TCGATCGCGTGAATGCAGAGTTGTTCACATTGACGTACGGTGCAATCGTGCGTCAATTGCTTACTGACCTCGAAGATGTCGATGAA
GTCAACAAACAGCTTGATCAAATGGGATACAACATTGGAATCAGACTTATCGATGAGTTTCTTGCCAAATCTGGCGTTTCCAGATG
CGTTGATTTCAAGGAAACTGCTGAAATGATTGCCAAGGTGGGTTTCAAGATGTTTTTGGGGGTCACTGCATCAGTGTCAAGCTGGG
ACGCGGACGGGACTTGCTGCAGTATCATCTTGGAAGACAATCCACCCGTTGATTTCGTGGAGCTTCCCGATACTTGCCAAGGGCTT
TACTACTGCAACGTTTAAGTGGAGTCATTAGAGGCGCTTTGGAAATGGTGTCAATGAAGACAGAAGTGACGTGGACGCGTGATGCT
CTTCGAGGGGATGATGCTTATGAGTTGCAGGTGAGGCTACTTAAGCAAGTCGCTGAGGAGTATCCGTACAAGGATGATGAATAAAT
TGGTCACTCCCGTGTGTAGCTTCTTGGCTCTTCTTTTCTTCTTCCAGAAACACAAACTCTGAGCTTTGAAACTGCATACTGTTTTA
TGTTTGGCATAAACCGATTAATCCATTTCTTAGCTGTTTTATAACTCAATGTGAGAAGAGTTGAGCGTATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAJ34550 unnamed protein product [Thellungiella halophila] | 676 | 8e-069 |
| XP_002864352 hypothetical protein ARALYDRAFT_357730 [Arabidopsis lyrata subsp. lyrata] | 675 | 1e-068 |
| NP_200286 Transport protein particle (TRAPP) component [Arabidopsis thaliana] | 673 | 2e-068 |
| XP_002522846 Trafficking protein particle complex subunit, putative [Ricinus communis] | 643 | 5e-065 |
| XP_002319811 predicted protein [Populus trichocarpa] | 631 | 1e-063 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q86K94 Trafficking protein particle complex subunit 3 | 419 | 2e-040 |
| Q5ZI57 Trafficking protein particle complex subunit 3 | 385 | 2e-036 |
| O55013 Trafficking protein particle complex subunit 3 | 380 | 7e-036 |
| Q5U1Z2 Trafficking protein particle complex subunit 3 | 380 | 7e-036 |
| O43617 Trafficking protein particle complex subunit 3 | 376 | 2e-035 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FFV2 AT5g54750/MBG8_1 | 673 | 1e-068 |
| B9SA27 Trafficking protein particle complex subunit, putative | 643 | 3e-065 |
| A9PCZ9 Predicted protein | 631 | 9e-064 |
| A5AU19 Putative uncharacterized protein | 626 | 3e-063 |
| C6SXA4 Putative uncharacterized protein | 620 | 2e-062 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G54750.1 transport protein particle (TRAPP) component Bet3, putative | 673 | 7e-071 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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