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Information for unigene UN41621

FASTA Sequence
Unigene ID: UN41621Length: 770 SSR 
GGGCTCCGCTCCGGCATCATCACCATCTAAACCCGAGTCTCTCTCTCTCTCAGTCTCTCTCACGGTCTTGGAAATGGCGACAGTAC
CGGGACAATTGGTATGGGAGATCGTTAAGAGAAACAACTGTTTCTTGGTCAAACAGTTCGGTAGAGGCAATGCCAAAGTTCAGTTC
AGTAAAGAGAAGAACAATCTCTGCAACCTCAACTCCTACAAGCACTCTGGTCTTGCGAACAAGAAGACAGTGACCATCCAGCCAGC
TGACAGGGAACAAGGTGTTGTCCTCGCCACCACCAAGACCAAGAAGCAGAACAAGCCTAAGGTCTCTGTCAACAAGTCTATCCTTA
AGAAGGAATTCCCCAGGATGTCTAATGCTGTTGCTAACCAGGTGGTTGACAACTACTACAGGCCAGACTTGAAGAAATTCGCTCTT
GCTAGACTCAGTGTCATCAGCAAAAGCATTAGGGTTGCCAAATCCGGTGCCAAGCAAAGAAACCGTCAAGCTTAAGCTTTTATTCA
AGATATGTGTTTGAAGTAAAACAGATTTTGCTAAAGAGGGTTTATGAAATTGTTTTTGTTGAAATTGAATCACAACACTATGGTTT
TTTTTATTATTTTAAAATGTGTTTTTTTATGCTTATGTTTCTTGTGGCTTGTGATATGAACTTTTGATTAAACCTCAAAGTTTCTT
GTCTTAACGAATTAGGCAAACAAAAATCGTTCTTATATACTGATGATGTAATAAACATGTGAACTGAGTCGGTTCAAAATTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ACF23027 ST45-109 [Eutrema halophilum]6873e-070
XP_002886025 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6481e-065
NP_179563 60S ribosomal protein L28-1 [Arabidopsis thaliana]6443e-065
XP_002867410 60S ribosomal protein L28 [Arabidopsis lyrata subsp. lyrata]6443e-065
NP_194670 60S ribosomal protein L28-2 [Arabidopsis thaliana]6301e-063

Swiss-Prot top hits (Blast detail)Scoree value
O82204 60S ribosomal protein L28-16442e-066
Q9M0E2 60S ribosomal protein L28-26306e-065
Q962T2 60S ribosomal protein L281961e-014
Q3T0L7 60S ribosomal protein L281763e-012
P46779 60S ribosomal protein L281763e-012

TrEMBL top hits (Blast detail)Scoree value
B4YYB0 ST45-1096872e-070
B9MST4 Putative ribosomal protein L285752e-057
A9P9G9 Predicted protein5709e-057
B9RKC5 60S ribosomal protein L28, putative5627e-056
A9P8K5 Predicted protein5555e-055

Arabidopsis top hits (Blast detail)Scoree value
AT2G19730.1 60S ribosomal protein L28 (RPL28A)6451e-067
AT2G19730.2 60S ribosomal protein L28 (RPL28A)6451e-067
AT2G19730.3 60S ribosomal protein L28 (RPL28A)6451e-067
AT4G29410.1 60S ribosomal protein L28 (RPL28C)6314e-066
AT4G29410.2 60S ribosomal protein L28 (RPL28C)6314e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information