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Information for unigene UN41632
| FASTA Sequence |
| Unigene ID: UN41632 | Length: 1326 |
SSR | | CAATAAAAAATAATTCCACGACTACATTTTAAACTTAAAAACGACAATAAATAAGTTTTTAAAAAGACTGGTTTATTATTAATAGA
GCTTAACAAAAAGGGGGGAAGAAAGGTTATTTGATTTTCGATTTGACAGAAGCATAAACGTAGAGATCTGGATCAGTCTCATAGAA
GACAATGTCACCAGTGTCACTGACGTAATGATCTTTCTTAATACTTGCTACCAAACTCTCCACCAAGTGGATCGGTATTGCTCCTG
ACGTCTTTGGTTCTCTGTAATATCTTCCCAACACATGTTTAGCTGCTTTTGTAGCATCGACCAAGTGATAGTGAGGGATTTGTGGG
AAAAGATGATGGATCACGTGAGTTCCAATGTCGTGATGAATGTTGTTGAAAATTCCGTAATCTCTGTCAATAGTTGTTAATCCTCC
ACGTAGGTAACTCCATTCCTTGCCTCTGTACCAAGGCAGCTTCTCATCATGACCATGGTGACGCAAGTAAGTGACAGCGTCCAACC
ACATCACGAAGATGATGTAAGGAACACCGTATACTTTGAGAACTGTGACTGGACCAACGAGGAAGGAAAGATAGATAAGAACAGCC
AACATTATGGACCAGCAAGTAGTTGAAGTTGCAATAAGCTTTCTTTCGCTTGGAGCAAATAAACCACTGTATGGGTTAAAATGTGA
CCCTTCTTTCCCAGGACTTCTGTACCACAGATAGATAGGGTAAGCGAGCATGGGGAGAGGGACAGTGTATCTGAGCATGCGAGTAC
TGTGGGGTAAATTCTTGTATAACTTTTCTGGTAACGGAACCCAAGACTCGTCGTTTTCAACATGGCCATGGTTCTGGTGGTGTGTC
CGATGGCTTATTCTCCAACCATGGTAAGGAACGAGGATGAAGGAATGAAGGATATGGCCAACCACACTATTCAGCAGAGGAATGTC
TGAGAAACTCCCATGTCCACAGTCGTGGCCGAGGACAAAGATGGCCCAGAAAAGGGTTCCTTGAGCGACCCAATAGAGAGGCCAGA
GGAACCAGCTATTAAAATACACGGCAGCAGTGGCCAAAGCCGCGACGGCGCAAATGTCTCTGGCGACGTAGCTCATAGATCTCAAA
GGACTTTTCACCCAACAATGCTTAGGAATCGCAGCTCTTATGTCCCCGATCTTAAACGGCGGTTGTACGCTCGGATCAAACCCTTC
TTCATTTCCTTTCCCATTGGTGCGTTGGTCCATAGCAACAACCATCCTGGGAGAGAGAGAGAGATTTGGAGGAATATTACCTCTCT
ATTATTTCAAAAAAAATGGAAGTGGGAAGTGGTGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| ADJ58019 fatty acid desaturase 3-N1 [Brassica juncea] | 1980 | 9e-220 |
| P48624 RecName: Full=Omega-3 fatty acid desaturase, endoplasmic reticulum | 1973 | 6e-219 |
| AAT09135 omega-3 fatty acid desaturase [Brassica napus] | 1970 | 1e-218 |
| AAA61775 omega-3 fatty acid desaturase [Brassica napus] | 1941 | 3e-215 |
| ADJ58020 fatty acid desaturase 3 [Brassica juncea] | 1933 | 3e-214 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P48624 Omega-3 fatty acid desaturase, endoplasmic reticulum | 1973 | 3e-220 |
| P48623 Omega-3 fatty acid desaturase, endoplasmic reticulum | 1876 | 5e-209 |
| P32291 Omega-3 fatty acid desaturase, endoplasmic reticulum | 1540 | 4e-170 |
| P48622 Temperature-sensitive omega-3 fatty acid desaturase, chloroplastic | 1516 | 3e-167 |
| P48619 Omega-3 fatty acid desaturase, chloroplastic | 1505 | 5e-166 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6PKU4 Omega-3 fatty acid desaturase | 1970 | 9e-219 |
| C5J3Q9 Fatty acid desaturase 3 | 1941 | 2e-215 |
| B4X946 Omega-3 fatty acid desaturase | 1916 | 2e-212 |
| A1E435 Omega-3 fatty acid desaturase | 1910 | 8e-212 |
| Q93Y93 Omega-3 fatty acid desaturase (Fragment) | 1620 | 4e-178 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G29980.1 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 1877 | 3e-210 |
| AT5G05580.1 FAD8 (FATTY ACID DESATURASE 8); omega-3 fatty acid desaturase | 1516 | 2e-168 |
| AT3G11170.1 FAD7 (FATTY ACID DESATURASE 7); omega-3 fatty acid desaturase | 1490 | 2e-165 |
| AT2G29980.2 FAD3 (FATTY ACID DESATURASE 3); omega-3 fatty acid desaturase | 1289 | 5e-142 |
| AT3G12120.1 FAD2 (FATTY ACID DESATURASE 2); delta12-fatty acid dehydrogenase/ omega-6 fatty acid desaturase | 592 | 3e-061 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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