Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN41676

FASTA Sequence
Unigene ID: UN41676Length: 703 SSR 
CGGGATCTTAAGGCACATCAAGGAATATCAGATTCAGACAAGAAGAAGCTGTCAAAACTTATTGACTTCCAGAAACTCTCACAAGA
GGCAGGAGCACACGCTGCGCAGAACGAGCGGCTTCCTCTGCAGTCAATAGTTCAGGTTCTCTACTTTGAGCAGCTTAAGCTCAGAA
GCTCCTTGTGCACTTCTTACTCAGACGAAGAGACAAAGCCAAAGCAGCAGCAGCAGCAGCAGCAGCAACAGCAACAGTCATGGAGA
ATCAACAGCGGAGCTCTCAGCGCAGCAATGTCACCAAAAGACAACTACGCGTCTCTGAGGAGAGAGAACAGGGAGCTGAAACTGGA
GTTGACTAGGTTGAGGATGAGACTCAACGATCTAGAGAAGGAGCATGTGTGCATGAAGAGAGATATGCAGAGGTCTCACTCGCGCA
AATTCATGAGCAGCTTCTCAAAGAAGATGGGGAAACTAAGCTTCTTTGGGAATAATCATCAGAGTTCATCGAGAGGATCAAGCTCT
CCATCGAAGCAGTCTTTTAGAACTGATTCAAAGGTGATTGAGAGGACTTGCGCAAGCATGGATTGATCAGCTTATCATTTTTCTTT
CTTATATATTCTCTTTACCTGTTGCTGCTGCTTGTTAAGTGAGTGCCAAGACTAGACTGTGAGTGAATGATATATTCTTGTAAAAT
GGATTTGATTTAATC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863924 phototropic-responsive NPH3 family protein [Arabidopsis lyrata subsp. lyrata]8423e-088
BAJ33928 unnamed protein product [Thellungiella halophila]8324e-087
NP_199691 Phototropic-responsive NPH3 protein [Arabidopsis thaliana]8316e-087
XP_002521098 protein binding protein, putative [Ricinus communis]4751e-045
ADN33739 phototropic-responsive NPH3 family protein [Cucumis melo subsp. melo]4392e-041

Swiss-Prot top hits (Blast detail)Scoree value
Q9FKB6 BTB/POZ domain-containing protein At5g488008313e-088
Q9S9Q9 BTB/POZ domain-containing protein At1g304402157e-017
Q9FMF5 Root phototropism protein 31995e-015
Q5KS50 Coleoptile phototropism protein 11701e-011
Q682S0 Root phototropism protein 21342e-007

TrEMBL top hits (Blast detail)Scoree value
B9S529 Protein binding protein, putative4757e-046
A5ATD6 Putative uncharacterized protein4221e-039
A9SBI7 Predicted protein3942e-036
B9IBI9 Predicted protein3897e-036
Q9SA69 F10O3.173897e-036

Arabidopsis top hits (Blast detail)Scoree value
AT5G48800.1 phototropic-responsive NPH3 family protein8313e-089
AT1G03010.1 phototropic-responsive NPH3 family protein3894e-038
AT2G47860.1 phototropic-responsive NPH3 family protein3384e-032
AT2G47860.2 phototropic-responsive NPH3 family protein3384e-032
AT3G44820.1 protein binding / signal transducer2273e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
73  100%

Unigene MembersMember information