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Information for unigene UN41707

FASTA Sequence
Unigene ID: UN41707Length: 835 SSR 
GGGGACTGGGAGGAGAGGAGAGGATCTACGAAACTTCGATTTGGGGGTTTTCTTTTCTTCTAGATCCTAGCTAATTCGTCTAAAGA
CGTCGCCTTTGACGACGACGACGACGACCCATTCATCTCGCTAACCTCGTTCTCCCTTTCTCTCTATTTCCCACGCACAACAAAAT
CTCTCACTTTTTTCCCTCAGATATGCCTTCCAATACGGCGTCGTCTAGCTCCGCCGCTGCCGGATCTGTAGATTCTTCCTCCTCCC
GTACAAAATCCAAACGACCCAAGTATTCGAAGTTTACACAGCAGGAGCTCCCTGCTTGCAAGCCTATTCTCACGCCTGGTTGGGTG
ATTCTGACTTTTTTAGTCATTAGTGTGATCTTCATTCCACTCGGAGTTGTTTCGCTTTTCGCTTCCCAGGATGTTGTTGAGATCGT
TGATCGGTATGATAATGATTGCGTACCTACGCCTGCTAGGGCTAACAAGGTTGCTTTTATTCAAGGAGGTGGAGACAAATCTTGTA
ACCGGACACTAGTGGTTCCTAAGAAGATGAAGCAGCCTATCTACGTTTATTACCAGCTTGAGAACTTCTACCAGAACCACCGCAGG
TATGTGAAAAGCAGAAGTGATGCGCAGTTGAGAAGTGTGAAAGATGAGAACCAAATCGATGCATGCAAGCCTGAGATGATGCTAAT
GGGCGGCCGATTGTGCCGTGTGGTCTATTGCTTGGAGTCTCTTTAATGACACATACGCTTTGTCCAAAACACCAGCCTTTGATGTA
AGCAGAGAGCATTGCGTGAAGAGTGACAGGACACATTTGGCAAAATGTATTTCCAAGACTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_566435 ALA-interacting subunit 1 [Arabidopsis thaliana]7214e-074
XP_002882787 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]7081e-072
NP_564656 ALA-interacting subunit 3 [Arabidopsis thaliana]7019e-072
XP_002894565 LEM3 (ligand-effect modulator 3) family protein [Arabidopsis lyrata subsp. lyrata]6938e-071
XP_002265244 PREDICTED: hypothetical protein [Vitis vinifera]6032e-060

Swiss-Prot top hits (Blast detail)Scoree value
Q9LTW0 ALA-interacting subunit 17212e-075
Q9SLK2 ALA-interacting subunit 37014e-073
Q8L8W0 ALA-interacting subunit 55958e-061
Q67YS6 Putative ALA-interacting subunit 23772e-035
Q9SA35 Putative ALA-interacting subunit 43332e-030

TrEMBL top hits (Blast detail)Scoree value
B9RRQ2 Putative uncharacterized protein5896e-059
B9HYB5 Predicted protein5582e-055
B9HI35 Predicted protein5521e-054
Q6BBR1 Putative uncharacterized protein Lj-CDC50 like 15242e-051
C6T8B4 Putative uncharacterized protein5206e-051

Arabidopsis top hits (Blast detail)Scoree value
AT3G12740.1 ALIS1 (ALA-INTERACTING SUBUNIT 1); phospholipid transporter7212e-076
AT1G54320.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein7014e-074
AT1G79450.1 ALIS5 (ALA-Interacting Subunit 5)5958e-062
AT1G16360.1 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein5213e-053
AT5G46150.2 LEM3 (ligand-effect modulator 3) family protein / CDC50 family protein3771e-036

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information