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Information for unigene UN41717
| FASTA Sequence |
| Unigene ID: UN41717 | Length: 761 |
SSR | | GGAATTATTCTCTCTCTCTCTTTCTTGATCTTGATCTCGATCTCCTGTGAGTAGTGTGTTTAAGTGGAGACAGAATCAGATTCAGA
GCCAAATCAAACTTGAGAAAATGGGATCTGGAGCTGGAAACTTCATCAAGGTTCTTTTGAGGAACTTCGATGTTCTTGCAGGGCCT
GTTGTTAGTCTCGTTTATCCACTACATGCCTCAGTCAGGGCAATTGAAACTCAATCTCACGCTGATGACAAACAATGGCTCACTTA
TTGGGTCCTTTACTCCTTACTTACACTCTTCGAGCTCACATTCGCCAAACTCATCGAATGGGTACCGATATGGTCGTATGCAAAGC
TGATTTTGACTTGCTGGCTTGTGATTCCCTACTTCAGCGGCGCTGCTTATGTCTACGAACATTTTGTGAGACCTGTGTTTGTCGAC
CCACAGAGCATTAACATTTGGTATGTGCCAAAGAAAATGGATATCTTCAAAAAGCCAGACGATGTGTTAACAGCTGCTGAGAAGTA
CATTGCAGAGAATGGAACTGATGCTTTTGAGAAGATCTTAAGCCGCTCTGACAAATCAAGAAGATATACGCAGCATGAGACCATGT
ATGGGGAAGAGTATCAGTACTAAGGGAACTACAAAAGCTTTTAGTTTTAGACTTGTGGGGCAAGTTTCATGTCTTTGATGTTGTTG
CTTTTGCTTCTTTGTGTGTGGATCTCTGCTGTGTAGAAAAAGTTATAAGAAACTTTATTGAAACTTGTTCAGT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_177592 HVA22-like protein a [Arabidopsis thaliana] | 834 | 3e-087 |
| XP_002888982 hypothetical protein ARALYDRAFT_476588 [Arabidopsis lyrata subsp. lyrata] | 829 | 1e-086 |
| ACU14456 unknown [Glycine max] | 717 | 1e-073 |
| XP_002511560 Protein HVA22, putative [Ricinus communis] | 711 | 5e-073 |
| XP_002317984 predicted protein [Populus trichocarpa] | 689 | 2e-070 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S7V4 HVA22-like protein a | 834 | 1e-088 |
| Q9S784 HVA22-like protein c | 503 | 3e-050 |
| Q9SYX7 HVA22-like protein b | 502 | 4e-050 |
| Q682H0 HVA22-like protein f | 328 | 7e-030 |
| Q9FED2 HVA22-like protein e | 293 | 7e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SYY3 Putative uncharacterized protein | 717 | 8e-074 |
| B9R985 Protein HVA22, putative | 711 | 4e-073 |
| A9PIC7 Predicted protein | 689 | 1e-070 |
| A5BHW6 Putative uncharacterized protein | 684 | 5e-070 |
| B9N4B8 Predicted protein | 676 | 4e-069 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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